STRINGSTRING
Cgl0678 Cgl0678 Cgl1245 Cgl1245 Cgl0679 Cgl0679 trpS trpS Cgl2853 Cgl2853 Cgl2709 Cgl2709 Cgl1096 Cgl1096 mdh mdh Cgl1915 Cgl1915 Cgl0014 Cgl0014 Cgl2932 Cgl2932
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0678Membrane protein ribonuclease BN-like family. (361 aa)    
Predicted Functional Partners:
Cgl1245
Conserved hypothetical protein.
 
    0.751
Cgl0679
Membrane protein.
  
    0.729
trpS
TRYPTOPHAN TRNA SYNTHETASE; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.660
Cgl2853
Universal stress protein UspA or related nucleotide-binding proteins.
   
    0.656
Cgl2709
PUTATIVE FERREDOXIN REDUCTASE.
   
    0.623
Cgl1096
Conserved hypothetical protein.
  
    0.622
mdh
MALATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN; Catalyzes the reversible oxidation of malate to oxaloacetate. Exhibits higher catalytic efficiency for oxaloacetate reduction than for malate oxidation in vitro. Almost equally active both for NADH and NADPH on the bases of the kcat values at pH 6.5, but catalytic efficiency for oxaloacetate reduction is 50-fold higher with NADH.
   
    0.571
Cgl1915
Putative membrane protein.
  
     0.567
Cgl0014
PUTATIVE INTEGRAL MEMBRANE PROTEIN.
  
    0.540
Cgl2932
Conserved hypothetical protein.
  
    0.537
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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