STRINGSTRING
dac dac dacB dacB ufaA ufaA pgsA1 pgsA1 Cgl0681 Cgl0681 ftsI ftsI Cgl0682 Cgl0682 mrcB mrcB pbp pbp Cgl1416 Cgl1416 upp upp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacD-ALANYL-D-ALANINE CARBOXYPEPTIDASE; Belongs to the peptidase S11 family. (436 aa)    
Predicted Functional Partners:
dacB
PENICILLIN-BINDING PROTEIN, D-ALA-D-ALA CARBOXYPEPTIDASE.
   
 
 0.998
ufaA
PUTATIVE CYCLOPROPANE FATTY ACID SYNTHASE (CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE).
   
  
 0.707
pgsA1
Phosphatidylglycerophosphate synthase; Catalyzes the conjugation of the 1'-hydroxyl group of D-myo- inositol-3-phosphate (also named L-myo-inositol-1-phosphate) with a lipid tail of cytidine diphosphate diacylglycerol (CDP-DAG), forming phosphatidylinositol phosphate (PIP) and CMP. PIP is a precursor of phosphatidylinositol (PI) which is an essential lipid required for cell wall formation.
     
 0.696
Cgl0681
Conserved hypothetical protein.
 
     0.643
ftsI
PENICILLIN-BINDING PROTEIN 2X.
 
  
 0.593
Cgl0682
PUTATIVE CELL WALL-ASSOCIATED HYDROLASE.
 
     0.575
mrcB
Membrane carboxypeptidase, PENICILLIN-BINDING PROTEIN.
  
  
 0.513
pbp
PENICILLIN-BINDING PROTEIN, PUTATIVE D-ALANYL-D-ALANINE CARBOXYPEPTIDASE.
 
  
 0.492
Cgl1416
Putative secreted protein.
  
     0.485
upp
PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
    0.477
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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