Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0681 | Cgl0682 | cg0783 | cg0784 | Conserved hypothetical protein. | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | 0.702 |
Cgl0681 | Cgl0683 | cg0783 | cg0785 | Conserved hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.581 |
Cgl0681 | upp | cg0783 | cg0786 | Conserved hypothetical protein. | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.601 |
Cgl0682 | Cgl0681 | cg0784 | cg0783 | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | Conserved hypothetical protein. | 0.702 |
Cgl0682 | Cgl0683 | cg0784 | cg0785 | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | Hypothetical protein predicted by Glimmer/Critica. | 0.797 |
Cgl0682 | upp | cg0784 | cg0786 | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.680 |
Cgl0683 | Cgl0681 | cg0785 | cg0783 | Hypothetical protein predicted by Glimmer/Critica. | Conserved hypothetical protein. | 0.581 |
Cgl0683 | Cgl0682 | cg0785 | cg0784 | Hypothetical protein predicted by Glimmer/Critica. | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | 0.797 |
Cgl0683 | upp | cg0785 | cg0786 | Hypothetical protein predicted by Glimmer/Critica. | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.560 |
upp | Cgl0681 | cg0786 | cg0783 | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | Conserved hypothetical protein. | 0.601 |
upp | Cgl0682 | cg0786 | cg0784 | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | 0.680 |
upp | Cgl0683 | cg0786 | cg0785 | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | Hypothetical protein predicted by Glimmer/Critica. | 0.560 |