Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0229 | Cgl0685 | cg0282 | cg0787 | Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Transcriptional regulator. | 0.979 |
Cgl0229 | Cgl2987 | cg0282 | cg3314 | Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Conserved hypothetical protein. | 0.656 |
Cgl0229 | nadA | cg0282 | cg1216 | Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family. | QUINOLINATE SYNTHETASE; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.686 |
Cgl0229 | rpmJ | cg0282 | cg2791 | Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.704 |
Cgl0681 | Cgl0682 | cg0783 | cg0784 | Conserved hypothetical protein. | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | 0.702 |
Cgl0681 | Cgl0685 | cg0783 | cg0787 | Conserved hypothetical protein. | Transcriptional regulator. | 0.548 |
Cgl0681 | Cgl2987 | cg0783 | cg3314 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.595 |
Cgl0681 | upp | cg0783 | cg0786 | Conserved hypothetical protein. | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.601 |
Cgl0682 | Cgl0681 | cg0784 | cg0783 | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | Conserved hypothetical protein. | 0.702 |
Cgl0682 | Cgl0685 | cg0784 | cg0787 | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | Transcriptional regulator. | 0.571 |
Cgl0682 | upp | cg0784 | cg0786 | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.680 |
Cgl0685 | Cgl0229 | cg0787 | cg0282 | Transcriptional regulator. | Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.979 |
Cgl0685 | Cgl0681 | cg0787 | cg0783 | Transcriptional regulator. | Conserved hypothetical protein. | 0.548 |
Cgl0685 | Cgl0682 | cg0787 | cg0784 | Transcriptional regulator. | PUTATIVE CELL WALL-ASSOCIATED HYDROLASE. | 0.571 |
Cgl0685 | Cgl2987 | cg0787 | cg3314 | Transcriptional regulator. | Conserved hypothetical protein. | 0.578 |
Cgl0685 | nadA | cg0787 | cg1216 | Transcriptional regulator. | QUINOLINATE SYNTHETASE; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.617 |
Cgl0685 | rpmJ | cg0787 | cg2791 | Transcriptional regulator. | Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.700 |
Cgl0685 | upp | cg0787 | cg0786 | Transcriptional regulator. | PUTATIVE URACIL PHOSPHORIBOSYLTRANSFERASE; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.676 |
Cgl2987 | Cgl0229 | cg3314 | cg0282 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.656 |
Cgl2987 | Cgl0681 | cg3314 | cg0783 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.595 |
page 1 of 2