Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0706 | Cgl0710 | cg0810 | cg0815 | Conserved hypothetical protein. | Membrane protein. | 0.471 |
Cgl0706 | accBC | cg0810 | cg0802 | Conserved hypothetical protein. | BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN. | 0.753 |
Cgl0706 | birA | cg0810 | cg0814 | Conserved hypothetical protein. | BIFUNCTIONAL BIOTIN LIGASE/BIOTIN OPERON REPRESSOR. | 0.837 |
Cgl0706 | dtsR1 | cg0810 | cg0812 | Conserved hypothetical protein. | ACETYL/PROPIONYL-COA CARBOXYLASE BETA CHAIN. | 0.599 |
Cgl0706 | dtsR2 | cg0810 | cg0811 | Conserved hypothetical protein. | ACETYL/PROPIONYL COA CARBOXYLASE, BETA SUBUNIT. | 0.942 |
Cgl0706 | pccB | cg0810 | cg3177 | Conserved hypothetical protein. | PROPIONYL-COA CARBOXYLASE BETA CHAIN. | 0.819 |
Cgl0710 | Cgl0706 | cg0815 | cg0810 | Membrane protein. | Conserved hypothetical protein. | 0.471 |
Cgl0710 | birA | cg0815 | cg0814 | Membrane protein. | BIFUNCTIONAL BIOTIN LIGASE/BIOTIN OPERON REPRESSOR. | 0.826 |
Cgl0710 | dtsR1 | cg0815 | cg0812 | Membrane protein. | ACETYL/PROPIONYL-COA CARBOXYLASE BETA CHAIN. | 0.568 |
Cgl0710 | purK | cg0815 | cg0816 | Membrane protein. | PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE ATPASE SUBUNIT; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.791 |
accBC | Cgl0706 | cg0802 | cg0810 | BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN. | Conserved hypothetical protein. | 0.753 |
accBC | birA | cg0802 | cg0814 | BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN. | BIFUNCTIONAL BIOTIN LIGASE/BIOTIN OPERON REPRESSOR. | 0.982 |
accBC | dtsR1 | cg0802 | cg0812 | BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN. | ACETYL/PROPIONYL-COA CARBOXYLASE BETA CHAIN. | 0.998 |
accBC | dtsR2 | cg0802 | cg0811 | BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN. | ACETYL/PROPIONYL COA CARBOXYLASE, BETA SUBUNIT. | 0.999 |
accBC | pccB | cg0802 | cg3177 | BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN. | PROPIONYL-COA CARBOXYLASE BETA CHAIN. | 0.995 |
accBC | pyc | cg0802 | cg0791 | BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN. | PYRUVATE CARBOXYLASE; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.801 |
bioB | birA | cg0095 | cg0814 | BIOTIN SYNTHASE; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | BIFUNCTIONAL BIOTIN LIGASE/BIOTIN OPERON REPRESSOR. | 0.961 |
birA | Cgl0706 | cg0814 | cg0810 | BIFUNCTIONAL BIOTIN LIGASE/BIOTIN OPERON REPRESSOR. | Conserved hypothetical protein. | 0.837 |
birA | Cgl0710 | cg0814 | cg0815 | BIFUNCTIONAL BIOTIN LIGASE/BIOTIN OPERON REPRESSOR. | Membrane protein. | 0.826 |
birA | accBC | cg0814 | cg0802 | BIFUNCTIONAL BIOTIN LIGASE/BIOTIN OPERON REPRESSOR. | BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN. | 0.982 |
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