Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0064 | Cgl1078 | cg0083 | cg1227 | Mononucleotide transporter. | Putative membrane protein. | 0.836 |
Cgl0064 | Cgl1307 | cg0083 | cg1478 | Mononucleotide transporter. | Hypothetical protein predicted by Glimmer/Critica. | 0.960 |
Cgl0064 | FabG | cg0083 | cg0825 | Mononucleotide transporter. | Short chain dehydrogenase, N-terminal fragment. | 0.700 |
Cgl0064 | thiE | cg0083 | cg2236 | Mononucleotide transporter. | THIAMIN-PHOSPHATE PYROPHOSPHORYLASE; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.784 |
Cgl0064 | thiM | cg0083 | cg1655 | Mononucleotide transporter. | HYDROXYETHYLTHIAZOLE KINASE; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.709 |
Cgl1078 | Cgl0064 | cg1227 | cg0083 | Putative membrane protein. | Mononucleotide transporter. | 0.836 |
Cgl1078 | Cgl1307 | cg1227 | cg1478 | Putative membrane protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.893 |
Cgl1078 | FabG | cg1227 | cg0825 | Putative membrane protein. | Short chain dehydrogenase, N-terminal fragment. | 0.707 |
Cgl1078 | thiE | cg1227 | cg2236 | Putative membrane protein. | THIAMIN-PHOSPHATE PYROPHOSPHORYLASE; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.753 |
Cgl1078 | thiM | cg1227 | cg1655 | Putative membrane protein. | HYDROXYETHYLTHIAZOLE KINASE; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.725 |
Cgl1307 | Cgl0064 | cg1478 | cg0083 | Hypothetical protein predicted by Glimmer/Critica. | Mononucleotide transporter. | 0.960 |
Cgl1307 | Cgl1078 | cg1478 | cg1227 | Hypothetical protein predicted by Glimmer/Critica. | Putative membrane protein. | 0.893 |
Cgl1307 | FabG | cg1478 | cg0825 | Hypothetical protein predicted by Glimmer/Critica. | Short chain dehydrogenase, N-terminal fragment. | 0.704 |
Cgl1307 | thiE | cg1478 | cg2236 | Hypothetical protein predicted by Glimmer/Critica. | THIAMIN-PHOSPHATE PYROPHOSPHORYLASE; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.797 |
Cgl1307 | thiM | cg1478 | cg1655 | Hypothetical protein predicted by Glimmer/Critica. | HYDROXYETHYLTHIAZOLE KINASE; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.791 |
Cgl2472 | FabG | cg2717 | cg0825 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short chain dehydrogenase, N-terminal fragment. | 0.983 |
Cgl2472 | fas-IA | cg2717 | cg2743 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | FATTY ACID SYNTHASE. | 0.478 |
Cgl2472 | fas-IB | cg2717 | cg0957 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | FATTY ACID SYNTHASE. | 0.436 |
FabG | Cgl0064 | cg0825 | cg0083 | Short chain dehydrogenase, N-terminal fragment. | Mononucleotide transporter. | 0.700 |
FabG | Cgl1078 | cg0825 | cg1227 | Short chain dehydrogenase, N-terminal fragment. | Putative membrane protein. | 0.707 |
page 1 of 3