Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0733 | Cgl0975 | cg0840 | cg1112 | Conserved hypothetical protein. | Septum formation initiator, secreted protein. | 0.639 |
Cgl0733 | Cgl1241 | cg0840 | cg1398 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.640 |
Cgl0733 | Cgl1374 | cg0840 | cg1556 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.670 |
Cgl0733 | aceB | cg0840 | cg2559 | Conserved hypothetical protein. | MALATE SYNTHASE; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.591 |
Cgl0733 | cps | cg0840 | cg3003 | Conserved hypothetical protein. | NON-RIBOSOMAL PEPTIDE SYNTHETASE. | 0.757 |
Cgl0733 | fas-IA | cg0840 | cg2743 | Conserved hypothetical protein. | FATTY ACID SYNTHASE. | 0.769 |
Cgl0733 | fas-IB | cg0840 | cg0957 | Conserved hypothetical protein. | FATTY ACID SYNTHASE. | 0.769 |
Cgl0733 | mctC | cg0840 | cg0953 | Conserved hypothetical protein. | Na+/proline, Na+/panthothenate symporter or related permease; Acts as a secondary carrier for acetate, propionate and pyruvate. Has high affinity for acetate and propionate and lower affinity for pyruvate. Driven by the electrochemical proton potential. Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.614 |
Cgl0733 | pcaF | cg0840 | cg2625 | Conserved hypothetical protein. | PUTATIVE ACETYL-COA:ACETYLTRANSFERASE; Belongs to the thiolase-like superfamily. Thiolase family. | 0.585 |
Cgl0733 | putA | cg0840 | cg0129 | Conserved hypothetical protein. | PROLINE DEHYDROGENASE/DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE. | 0.826 |
Cgl0975 | Cgl0733 | cg1112 | cg0840 | Septum formation initiator, secreted protein. | Conserved hypothetical protein. | 0.639 |
Cgl1241 | Cgl0733 | cg1398 | cg0840 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.640 |
Cgl1374 | Cgl0733 | cg1556 | cg0840 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.670 |
aceB | Cgl0733 | cg2559 | cg0840 | MALATE SYNTHASE; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | Conserved hypothetical protein. | 0.591 |
aceB | fas-IA | cg2559 | cg2743 | MALATE SYNTHASE; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | FATTY ACID SYNTHASE. | 0.500 |
aceB | fas-IB | cg2559 | cg0957 | MALATE SYNTHASE; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | FATTY ACID SYNTHASE. | 0.492 |
aceB | mctC | cg2559 | cg0953 | MALATE SYNTHASE; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | Na+/proline, Na+/panthothenate symporter or related permease; Acts as a secondary carrier for acetate, propionate and pyruvate. Has high affinity for acetate and propionate and lower affinity for pyruvate. Driven by the electrochemical proton potential. Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.682 |
aceB | pcaF | cg2559 | cg2625 | MALATE SYNTHASE; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | PUTATIVE ACETYL-COA:ACETYLTRANSFERASE; Belongs to the thiolase-like superfamily. Thiolase family. | 0.933 |
cps | Cgl0733 | cg3003 | cg0840 | NON-RIBOSOMAL PEPTIDE SYNTHETASE. | Conserved hypothetical protein. | 0.757 |
cps | fas-IA | cg3003 | cg2743 | NON-RIBOSOMAL PEPTIDE SYNTHETASE. | FATTY ACID SYNTHASE. | 0.747 |
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