Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0587 | Cgl0681 | cg0680 | cg0783 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.775 |
Cgl0587 | Cgl0885 | cg0680 | cg1007 | Conserved hypothetical protein. | Putative membrane protein. | 0.775 |
Cgl0587 | embC | cg0680 | cg0235 | Conserved hypothetical protein. | Probable arabinosyltransferase, membrane protein. | 0.729 |
Cgl0587 | lcpA | cg0680 | cg0847 | Conserved hypothetical protein. | Putative transcriptional regulator; Involved in cell wall biosynthesis. May be responsible for the transfer of arabinogalactan onto peptidoglycan. In vitro, has pyrophosphatase activity. | 0.611 |
Cgl0587 | rmlA2 | cg0680 | cg0849 | Conserved hypothetical protein. | GDP-MANNOSE PYROPHOSPHORYLASE. | 0.408 |
Cgl0587 | wbbL | cg0680 | cg0848 | Conserved hypothetical protein. | Putative rhamnosyl transferase WbbL. | 0.507 |
Cgl0681 | Cgl0587 | cg0783 | cg0680 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.775 |
Cgl0681 | Cgl0885 | cg0783 | cg1007 | Conserved hypothetical protein. | Putative membrane protein. | 0.774 |
Cgl0681 | embC | cg0783 | cg0235 | Conserved hypothetical protein. | Probable arabinosyltransferase, membrane protein. | 0.693 |
Cgl0681 | lcpA | cg0783 | cg0847 | Conserved hypothetical protein. | Putative transcriptional regulator; Involved in cell wall biosynthesis. May be responsible for the transfer of arabinogalactan onto peptidoglycan. In vitro, has pyrophosphatase activity. | 0.697 |
Cgl0681 | wbbL | cg0783 | cg0848 | Conserved hypothetical protein. | Putative rhamnosyl transferase WbbL. | 0.638 |
Cgl0885 | Cgl0587 | cg1007 | cg0680 | Putative membrane protein. | Conserved hypothetical protein. | 0.775 |
Cgl0885 | Cgl0681 | cg1007 | cg0783 | Putative membrane protein. | Conserved hypothetical protein. | 0.774 |
Cgl0885 | embC | cg1007 | cg0235 | Putative membrane protein. | Probable arabinosyltransferase, membrane protein. | 0.769 |
Cgl0885 | lcpA | cg1007 | cg0847 | Putative membrane protein. | Putative transcriptional regulator; Involved in cell wall biosynthesis. May be responsible for the transfer of arabinogalactan onto peptidoglycan. In vitro, has pyrophosphatase activity. | 0.693 |
Cgl0885 | wbbL | cg1007 | cg0848 | Putative membrane protein. | Putative rhamnosyl transferase WbbL. | 0.421 |
Cgl2996 | lcpA | cg3323 | cg0847 | Myo-inositol-1-phosphate synthase. | Putative transcriptional regulator; Involved in cell wall biosynthesis. May be responsible for the transfer of arabinogalactan onto peptidoglycan. In vitro, has pyrophosphatase activity. | 0.689 |
Cgl2996 | lcpB | cg3323 | cg3210 | Myo-inositol-1-phosphate synthase. | Cell envelope-related transcriptional regulator. | 0.620 |
embC | Cgl0587 | cg0235 | cg0680 | Probable arabinosyltransferase, membrane protein. | Conserved hypothetical protein. | 0.729 |
embC | Cgl0681 | cg0235 | cg0783 | Probable arabinosyltransferase, membrane protein. | Conserved hypothetical protein. | 0.693 |
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