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rmlA2 rmlA2 pmmA pmmA rmlCD rmlCD pmmB pmmB rmlA1 rmlA1 manA manA lcpA lcpA rimM rimM valS valS hpf hpf wbbL wbbL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmlA2GDP-MANNOSE PYROPHOSPHORYLASE. (362 aa)    
Predicted Functional Partners:
pmmA
PHOSPHOMANNOMUTASE.
  
 
 0.978
rmlCD
DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, dtdp-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.957
pmmB
PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE.
  
 
 0.948
rmlA1
TDP-GLUCOSE PYROPHOSPHORYLASE; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
0.777
manA
MANNOSE-6-PHOSPHATE ISOMERASE.
  
 
 0.770
lcpA
Putative transcriptional regulator; Involved in cell wall biosynthesis. May be responsible for the transfer of arabinogalactan onto peptidoglycan. In vitro, has pyrophosphatase activity.
 
     0.731
rimM
RIMM PROTEIN (16S RRNA PROCESSING PROTEIN); An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.
   
  
 0.721
valS
PUTATIVE VALINE-TRNA LIGASE; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
  
    0.673
hpf
Ribosome-associated protein Y (PSrp-1); Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
     
 0.649
wbbL
Putative rhamnosyl transferase WbbL.
  
    0.633
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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