Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0650 | Cgl0786 | cg0752 | cg0896 | PUTATIVE secreted or MEMBRANE PROTEIN. | Membrane protein. | 0.773 |
Cgl0650 | Cgl1374 | cg0752 | cg1556 | PUTATIVE secreted or MEMBRANE PROTEIN. | Conserved hypothetical protein. | 0.774 |
Cgl0650 | Cgl2030 | cg0752 | cg2227 | PUTATIVE secreted or MEMBRANE PROTEIN. | Predicted ATPase with chaperone activity. | 0.709 |
Cgl0650 | Cgl2539 | cg0752 | cg2797 | PUTATIVE secreted or MEMBRANE PROTEIN. | Conserved hypothetical protein. | 0.745 |
Cgl0650 | atpD | cg0752 | cg1368 | PUTATIVE secreted or MEMBRANE PROTEIN. | ATP SYNTHASE ALPHA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.401 |
Cgl0650 | atpF | cg0752 | cg1364 | PUTATIVE secreted or MEMBRANE PROTEIN. | ATP synthase B chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.475 |
Cgl0650 | atpH | cg0752 | cg1365 | PUTATIVE secreted or MEMBRANE PROTEIN. | H+-ATPASE DELTA SUBUNIT; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.474 |
Cgl0784 | Cgl0785 | cg0894 | cg0895 | Conserved hypothetical protein, possibly secreted. | Conserved hypothetical protein. | 0.689 |
Cgl0784 | Cgl0786 | cg0894 | cg0896 | Conserved hypothetical protein, possibly secreted. | Membrane protein. | 0.583 |
Cgl0785 | Cgl0784 | cg0895 | cg0894 | Conserved hypothetical protein. | Conserved hypothetical protein, possibly secreted. | 0.689 |
Cgl0785 | Cgl0786 | cg0895 | cg0896 | Conserved hypothetical protein. | Membrane protein. | 0.679 |
Cgl0786 | Cgl0650 | cg0896 | cg0752 | Membrane protein. | PUTATIVE secreted or MEMBRANE PROTEIN. | 0.773 |
Cgl0786 | Cgl0784 | cg0896 | cg0894 | Membrane protein. | Conserved hypothetical protein, possibly secreted. | 0.583 |
Cgl0786 | Cgl0785 | cg0896 | cg0895 | Membrane protein. | Conserved hypothetical protein. | 0.679 |
Cgl0786 | Cgl1374 | cg0896 | cg1556 | Membrane protein. | Conserved hypothetical protein. | 0.798 |
Cgl0786 | Cgl2030 | cg0896 | cg2227 | Membrane protein. | Predicted ATPase with chaperone activity. | 0.802 |
Cgl0786 | Cgl2539 | cg0896 | cg2797 | Membrane protein. | Conserved hypothetical protein. | 0.703 |
Cgl0786 | atpD | cg0896 | cg1368 | Membrane protein. | ATP SYNTHASE ALPHA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.452 |
Cgl0786 | atpF | cg0896 | cg1364 | Membrane protein. | ATP synthase B chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.537 |
Cgl0786 | atpH | cg0896 | cg1365 | Membrane protein. | H+-ATPASE DELTA SUBUNIT; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.458 |
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