Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0373 | Cgl0673 | cg0448 | cg0775 | Conserved hypothetical membrane protein. | Hypothetical protein. | 0.800 |
Cgl0373 | Cgl0818 | cg0448 | cg0935 | Conserved hypothetical membrane protein. | Conserved hypothetical protein. | 0.801 |
Cgl0373 | Cgl2017 | cg0448 | cg2211 | Conserved hypothetical membrane protein. | Putative membrane protein. | 0.900 |
Cgl0373 | Cgl2664 | cg0448 | cg2949 | Conserved hypothetical membrane protein. | Putative secreted protein. | 0.801 |
Cgl0373 | ctaC | cg0448 | cg2409 | Conserved hypothetical membrane protein. | CYTOCHROME C OXIDASE CHAIN II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (By similarity). | 0.903 |
Cgl0373 | ctaD | cg0448 | cg2780 | Conserved hypothetical membrane protein. | PROBABLE CYTOCHROME C OXIDASE POLYPEPTIDE SUBUNIT; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (By similarity). | 0.911 |
Cgl0373 | ctaE | cg0448 | cg2406 | Conserved hypothetical membrane protein. | CYTOCHROME C OXIDASE SUBUNIT 3. | 0.827 |
Cgl0373 | ctaF | cg0448 | cg2408 | Conserved hypothetical membrane protein. | Putative membrane protein; Part of cytochrome c oxidase, its function is unknown; Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.912 |
Cgl0373 | qcrB | cg0448 | cg2403 | Conserved hypothetical membrane protein. | CYTOCHROME B, MEMBRANE PROTEIN; Cytochrome b subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.839 |
Cgl0373 | qcrC | cg0448 | cg2405 | Conserved hypothetical membrane protein. | CYTOCHROME C1; Cytochrome c1 subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.813 |
Cgl0673 | Cgl0373 | cg0775 | cg0448 | Hypothetical protein. | Conserved hypothetical membrane protein. | 0.800 |
Cgl0673 | Cgl0818 | cg0775 | cg0935 | Hypothetical protein. | Conserved hypothetical protein. | 0.800 |
Cgl0673 | Cgl2017 | cg0775 | cg2211 | Hypothetical protein. | Putative membrane protein. | 0.900 |
Cgl0673 | Cgl2664 | cg0775 | cg2949 | Hypothetical protein. | Putative secreted protein. | 0.800 |
Cgl0673 | ctaC | cg0775 | cg2409 | Hypothetical protein. | CYTOCHROME C OXIDASE CHAIN II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (By similarity). | 0.900 |
Cgl0673 | ctaD | cg0775 | cg2780 | Hypothetical protein. | PROBABLE CYTOCHROME C OXIDASE POLYPEPTIDE SUBUNIT; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (By similarity). | 0.900 |
Cgl0673 | ctaE | cg0775 | cg2406 | Hypothetical protein. | CYTOCHROME C OXIDASE SUBUNIT 3. | 0.800 |
Cgl0673 | ctaF | cg0775 | cg2408 | Hypothetical protein. | Putative membrane protein; Part of cytochrome c oxidase, its function is unknown; Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.800 |
Cgl0673 | qcrB | cg0775 | cg2403 | Hypothetical protein. | CYTOCHROME B, MEMBRANE PROTEIN; Cytochrome b subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.800 |
Cgl0673 | qcrC | cg0775 | cg2405 | Hypothetical protein. | CYTOCHROME C1; Cytochrome c1 subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.800 |
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