Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl0716 | rpf1 | cg0822 | cg0936 | Conserved hypothetical protein. | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.487 |
| Cgl0733 | rpf1 | cg0840 | cg0936 | Conserved hypothetical protein. | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.494 |
| Cgl0733 | thrE | cg0840 | cg2905 | Conserved hypothetical protein. | THREONINE EXPORT CARRIER. | 0.422 |
| Cgl0858 | cwlM | cg0980 | cg3424 | Secreted protein related to metalloendopeptidases. | N-ACETYMURAMYL-L-ALANINE AMIDASE. | 0.496 |
| Cgl0858 | rpf1 | cg0980 | cg0936 | Secreted protein related to metalloendopeptidases. | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.414 |
| Cgl1283 | rpf1 | cg1449 | cg0936 | Conserved hypothetical protein. | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.550 |
| Cgl1568 | mptB | cg1768 | cg1766 | ABC-type multidrug transport system, permease component. | Putative membrane protein; Involved in the initiation of core alpha-(1->6) mannan biosynthesis of lipomannan (LM-A) and multi-mannosylated polymer (LM- B), extending triacylatedphosphatidyl-myo-inositol dimannoside (Ac1PIM2) and mannosylated glycolipid, 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1->4)-(alpha-D-glucopyranosyluronic acid)-(1->3)- glycerol (Man1GlcAGroAc2), respectively. Catalyzes the addition of alpha-(1->6)-mannose residue; Belongs to the MptA/B family. | 0.928 |
| Cgl1568 | rpf1 | cg1768 | cg0936 | ABC-type multidrug transport system, permease component. | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.470 |
| crtYe | rpf1 | cg0719 | cg0936 | C50 CAROTENOID EPSILON CYCLASE. | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.405 |
| cwlM | Cgl0858 | cg3424 | cg0980 | N-ACETYMURAMYL-L-ALANINE AMIDASE. | Secreted protein related to metalloendopeptidases. | 0.496 |
| cwlM | mptB | cg3424 | cg1766 | N-ACETYMURAMYL-L-ALANINE AMIDASE. | Putative membrane protein; Involved in the initiation of core alpha-(1->6) mannan biosynthesis of lipomannan (LM-A) and multi-mannosylated polymer (LM- B), extending triacylatedphosphatidyl-myo-inositol dimannoside (Ac1PIM2) and mannosylated glycolipid, 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1->4)-(alpha-D-glucopyranosyluronic acid)-(1->3)- glycerol (Man1GlcAGroAc2), respectively. Catalyzes the addition of alpha-(1->6)-mannose residue; Belongs to the MptA/B family. | 0.545 |
| cwlM | rpf1 | cg3424 | cg0936 | N-ACETYMURAMYL-L-ALANINE AMIDASE. | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.475 |
| mptB | Cgl1568 | cg1766 | cg1768 | Putative membrane protein; Involved in the initiation of core alpha-(1->6) mannan biosynthesis of lipomannan (LM-A) and multi-mannosylated polymer (LM- B), extending triacylatedphosphatidyl-myo-inositol dimannoside (Ac1PIM2) and mannosylated glycolipid, 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1->4)-(alpha-D-glucopyranosyluronic acid)-(1->3)- glycerol (Man1GlcAGroAc2), respectively. Catalyzes the addition of alpha-(1->6)-mannose residue; Belongs to the MptA/B family. | ABC-type multidrug transport system, permease component. | 0.928 |
| mptB | cwlM | cg1766 | cg3424 | Putative membrane protein; Involved in the initiation of core alpha-(1->6) mannan biosynthesis of lipomannan (LM-A) and multi-mannosylated polymer (LM- B), extending triacylatedphosphatidyl-myo-inositol dimannoside (Ac1PIM2) and mannosylated glycolipid, 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1->4)-(alpha-D-glucopyranosyluronic acid)-(1->3)- glycerol (Man1GlcAGroAc2), respectively. Catalyzes the addition of alpha-(1->6)-mannose residue; Belongs to the MptA/B family. | N-ACETYMURAMYL-L-ALANINE AMIDASE. | 0.545 |
| mptB | rpf1 | cg1766 | cg0936 | Putative membrane protein; Involved in the initiation of core alpha-(1->6) mannan biosynthesis of lipomannan (LM-A) and multi-mannosylated polymer (LM- B), extending triacylatedphosphatidyl-myo-inositol dimannoside (Ac1PIM2) and mannosylated glycolipid, 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1->4)-(alpha-D-glucopyranosyluronic acid)-(1->3)- glycerol (Man1GlcAGroAc2), respectively. Catalyzes the addition of alpha-(1->6)-mannose residue; Belongs to the MptA/B family. | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.484 |
| rpf1 | Cgl0716 | cg0936 | cg0822 | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | Conserved hypothetical protein. | 0.487 |
| rpf1 | Cgl0733 | cg0936 | cg0840 | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | Conserved hypothetical protein. | 0.494 |
| rpf1 | Cgl0858 | cg0936 | cg0980 | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | Secreted protein related to metalloendopeptidases. | 0.414 |
| rpf1 | Cgl1283 | cg0936 | cg1449 | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | Conserved hypothetical protein. | 0.550 |
| rpf1 | Cgl1568 | cg0936 | cg1768 | PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | ABC-type multidrug transport system, permease component. | 0.470 |
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