Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl0739 | Cgl0820 | cg0845 | cg0938 | Superfamily II DNA/RNA helicase, SNF2 family. | Cold shock protein. | 0.678 |
| Cgl0739 | cspA2 | cg0845 | cg0371 | Superfamily II DNA/RNA helicase, SNF2 family. | COLD-SHOCK PROTEIN CSPA. | 0.650 |
| Cgl0739 | gmk | cg0845 | cg1810 | Superfamily II DNA/RNA helicase, SNF2 family. | PROBABLE GUANYLATE KINASE PROTEIN; Essential for recycling GMP and indirectly, cGMP. | 0.610 |
| Cgl0739 | rplV | cg0845 | cg0600 | Superfamily II DNA/RNA helicase, SNF2 family. | RIBOSOMAL PROTEIN L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.613 |
| Cgl0739 | rpoZ | cg0845 | cg1809 | Superfamily II DNA/RNA helicase, SNF2 family. | DNA-directed RNA polymerase subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.951 |
| Cgl0820 | Cgl0739 | cg0938 | cg0845 | Cold shock protein. | Superfamily II DNA/RNA helicase, SNF2 family. | 0.678 |
| Cgl0820 | apt | cg0938 | cg1862 | Cold shock protein. | ADENINE PHOSPHORIBOSYLTRANSFERASE; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.472 |
| Cgl0820 | cspA2 | cg0938 | cg0371 | Cold shock protein. | COLD-SHOCK PROTEIN CSPA. | 0.608 |
| Cgl0820 | gmk | cg0938 | cg1810 | Cold shock protein. | PROBABLE GUANYLATE KINASE PROTEIN; Essential for recycling GMP and indirectly, cGMP. | 0.493 |
| Cgl0820 | prfA | cg0938 | cg1355 | Cold shock protein. | PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.625 |
| Cgl0820 | rplV | cg0938 | cg0600 | Cold shock protein. | RIBOSOMAL PROTEIN L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.496 |
| Cgl0820 | rplY | cg0938 | cg1072 | Cold shock protein. | Ribosomal protein L25 (general stress protein Ctc); This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.494 |
| Cgl0820 | rpoZ | cg0938 | cg1809 | Cold shock protein. | DNA-directed RNA polymerase subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.526 |
| Cgl0820 | rpsL | cg0938 | cg0581 | Cold shock protein. | RIBOSOMAL PROTEIN S12; With S4 and S5 plays an important role in translational accuracy. | 0.511 |
| Cgl0820 | tyrA | cg0938 | cg0279 | Cold shock protein. | PUTATIVE PREPHENATE DEHYDROGENASE. | 0.792 |
| apt | Cgl0820 | cg1862 | cg0938 | ADENINE PHOSPHORIBOSYLTRANSFERASE; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Cold shock protein. | 0.472 |
| apt | gmk | cg1862 | cg1810 | ADENINE PHOSPHORIBOSYLTRANSFERASE; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | PROBABLE GUANYLATE KINASE PROTEIN; Essential for recycling GMP and indirectly, cGMP. | 0.989 |
| apt | tyrA | cg1862 | cg0279 | ADENINE PHOSPHORIBOSYLTRANSFERASE; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | PUTATIVE PREPHENATE DEHYDROGENASE. | 0.876 |
| cspA2 | Cgl0739 | cg0371 | cg0845 | COLD-SHOCK PROTEIN CSPA. | Superfamily II DNA/RNA helicase, SNF2 family. | 0.650 |
| cspA2 | Cgl0820 | cg0371 | cg0938 | COLD-SHOCK PROTEIN CSPA. | Cold shock protein. | 0.608 |
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