STRINGSTRING
Cgl0871 Cgl0871 Cgl0870 Cgl0870 Cgl2279 Cgl2279 mnhD mnhD mrpD mrpD rpmE rpmE rpsN rpsN rpmF rpmF rpmG rpmG rpmB rpmB rpsR rpsR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0871Bacterial regulatory protein, arsR fam. (104 aa)    
Predicted Functional Partners:
Cgl0870
Sulfate permease or related transporter (MFS superfamily).
 
    0.840
Cgl2279
Bacterial regulatory proteins, ArsR family.
  
   
 0.482
mnhD
Hydrogenlyase subunit 3/Multisubunit Na+/H+ antipoter, MnhD subunit.
  
  
 0.481
mrpD
NADH-ubiquinone oxidoreductase/Multisubunit Na+/H+ antiporter, D subunit.
  
  
 0.481
rpmE
PROBABLE 50S RIBOSOMAL SUBUNIT PROTEIN L31.
     
 0.475
rpsN
30S RIBOSOMAL PROTEIN S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.466
rpmF
Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family.
     
 0.465
rpmG
50S RIBOSOMAL PROTEIN L33; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.462
rpmB
50S RIBOSOMAL PROTEIN L28; Belongs to the bacterial ribosomal protein bL28 family.
       0.452
rpsR
30S RIBOSOMAL PROTEIN S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.438
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.