Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0014 | Cgl0853 | cg0016 | cg0975 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | Putative chorismate mutase. | 0.704 |
Cgl0014 | Cgl0888 | cg0016 | cg1011 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | Putative membrane protein. | 0.725 |
Cgl0014 | Cgl1961 | cg0016 | cg2151 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | Similar to phage shock protein A. | 0.710 |
Cgl0014 | Cgl2179 | cg0016 | cg2392 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.765 |
Cgl0014 | Cgl2949 | cg0016 | cg3264 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | Conserved hypothetical protein. | 0.721 |
Cgl0014 | ribX | cg0016 | cg1796 | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | Putative membrane protein-C. ammoniagenes RibX homolog. | 0.742 |
Cgl0853 | Cgl0014 | cg0975 | cg0016 | Putative chorismate mutase. | PUTATIVE INTEGRAL MEMBRANE PROTEIN. | 0.704 |
Cgl0853 | Cgl0885 | cg0975 | cg1007 | Putative chorismate mutase. | Putative membrane protein. | 0.652 |
Cgl0853 | Cgl0888 | cg0975 | cg1011 | Putative chorismate mutase. | Putative membrane protein. | 0.725 |
Cgl0853 | Cgl1961 | cg0975 | cg2151 | Putative chorismate mutase. | Similar to phage shock protein A. | 0.773 |
Cgl0853 | Cgl2179 | cg0975 | cg2392 | Putative chorismate mutase. | Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.783 |
Cgl0853 | Cgl2949 | cg0975 | cg3264 | Putative chorismate mutase. | Conserved hypothetical protein. | 0.776 |
Cgl0853 | ribX | cg0975 | cg1796 | Putative chorismate mutase. | Putative membrane protein-C. ammoniagenes RibX homolog. | 0.774 |
Cgl0885 | Cgl0853 | cg1007 | cg0975 | Putative membrane protein. | Putative chorismate mutase. | 0.652 |
Cgl0885 | Cgl0887 | cg1007 | cg1010 | Putative membrane protein. | Putative membrane protein. | 0.690 |
Cgl0885 | Cgl0888 | cg1007 | cg1011 | Putative membrane protein. | Putative membrane protein. | 0.680 |
Cgl0885 | Cgl0889 | cg1007 | cg1012 | Putative membrane protein. | CYCLOMALTODEXTRINASE. | 0.602 |
Cgl0885 | Cgl1961 | cg1007 | cg2151 | Putative membrane protein. | Similar to phage shock protein A. | 0.643 |
Cgl0885 | Cgl2179 | cg1007 | cg2392 | Putative membrane protein. | Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.487 |
Cgl0885 | Cgl2949 | cg1007 | cg3264 | Putative membrane protein. | Conserved hypothetical protein. | 0.616 |
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