Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0524 | Cgl2746 | cg0611 | cg3041 | Secreted protein. | ABC-type multidrug transport system, permease component. | 0.437 |
Cgl0524 | mmpL1 | cg0611 | cg3174 | Secreted protein. | Exporter of the MMPL family. | 0.416 |
Cgl0524 | mmpL2 | cg0611 | cg1054 | Secreted protein. | Drug exporter of the RND superfamily. | 0.400 |
Cgl0921 | Cgl0923 | cg1051 | cg1053 | Hypothetical protein predicted by Glimmer/Critica. | PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR. | 0.982 |
Cgl0921 | mmpL2 | cg1051 | cg1054 | Hypothetical protein predicted by Glimmer/Critica. | Drug exporter of the RND superfamily. | 0.981 |
Cgl0923 | Cgl0921 | cg1053 | cg1051 | PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR. | Hypothetical protein predicted by Glimmer/Critica. | 0.982 |
Cgl0923 | menG | cg1053 | cg1055 | PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR. | S-ADENOSYLMETHIONINE:2-DEMETHYLMENAQUINONE METHYLT; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity). | 0.470 |
Cgl0923 | mmpL2 | cg1053 | cg1054 | PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR. | Drug exporter of the RND superfamily. | 0.997 |
Cgl1064 | mmpL2 | cg1211 | cg1054 | PUTATIVE MARR-FAMILY TRANSCRIPTIONAL REGULATOR. | Drug exporter of the RND superfamily. | 0.805 |
Cgl2746 | Cgl0524 | cg3041 | cg0611 | ABC-type multidrug transport system, permease component. | Secreted protein. | 0.437 |
Cgl2746 | mmpL1 | cg3041 | cg3174 | ABC-type multidrug transport system, permease component. | Exporter of the MMPL family. | 0.440 |
Cgl2746 | mmpL2 | cg3041 | cg1054 | ABC-type multidrug transport system, permease component. | Drug exporter of the RND superfamily. | 0.405 |
Cgl2995 | mmpL2 | cg3322 | cg1054 | Putative secreted membrane-fusion protein. | Drug exporter of the RND superfamily. | 0.453 |
menG | Cgl0923 | cg1055 | cg1053 | S-ADENOSYLMETHIONINE:2-DEMETHYLMENAQUINONE METHYLT; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity). | PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR. | 0.470 |
menG | mmpL2 | cg1055 | cg1054 | S-ADENOSYLMETHIONINE:2-DEMETHYLMENAQUINONE METHYLT; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity). | Drug exporter of the RND superfamily. | 0.457 |
mmpL1 | Cgl0524 | cg3174 | cg0611 | Exporter of the MMPL family. | Secreted protein. | 0.416 |
mmpL1 | Cgl2746 | cg3174 | cg3041 | Exporter of the MMPL family. | ABC-type multidrug transport system, permease component. | 0.440 |
mmpL1 | mmpL2 | cg3174 | cg1054 | Exporter of the MMPL family. | Drug exporter of the RND superfamily. | 0.512 |
mmpL2 | Cgl0524 | cg1054 | cg0611 | Drug exporter of the RND superfamily. | Secreted protein. | 0.400 |
mmpL2 | Cgl0921 | cg1054 | cg1051 | Drug exporter of the RND superfamily. | Hypothetical protein predicted by Glimmer/Critica. | 0.981 |
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