Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0190 | pth2 | cg0238 | cg1067 | L-GULONOLACTONE OXIDASE. | PEPTIDYL-TRNA HYDROLASE; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.707 |
Cgl0572 | pth2 | cg0662 | cg1067 | FAD/FMN-containing dehydrogenase. | PEPTIDYL-TRNA HYDROLASE; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.707 |
Cgl0936 | pth2 | cg1068 | cg1067 | PROBABLE OXIDOREDUCTASE. | PEPTIDYL-TRNA HYDROLASE; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.689 |
Cgl1175 | Cgl1674 | cg1328 | cg1884 | Putative Copper chaperone. | Putative membrane protein. | 0.804 |
Cgl1175 | Cgl2521 | cg1328 | cg2778 | Putative Copper chaperone. | Conserved hypothetical protein. | 0.794 |
Cgl1175 | pth2 | cg1328 | cg1067 | Putative Copper chaperone. | PEPTIDYL-TRNA HYDROLASE; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.712 |
Cgl1674 | Cgl1175 | cg1884 | cg1328 | Putative membrane protein. | Putative Copper chaperone. | 0.804 |
Cgl1674 | Cgl2521 | cg1884 | cg2778 | Putative membrane protein. | Conserved hypothetical protein. | 0.980 |
Cgl1674 | Cgl2971 | cg1884 | cg3292 | Putative membrane protein. | Copper chaperone. | 0.804 |
Cgl1674 | Cgl2977 | cg1884 | cg3300 | Putative membrane protein. | Cation transport ATPase. | 0.805 |
Cgl1674 | Cgl3081 | cg1884 | cg3411 | Putative membrane protein. | Copper chaperone. | 0.788 |
Cgl1674 | pth2 | cg1884 | cg1067 | Putative membrane protein. | PEPTIDYL-TRNA HYDROLASE; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.966 |
Cgl2521 | Cgl1175 | cg2778 | cg1328 | Conserved hypothetical protein. | Putative Copper chaperone. | 0.794 |
Cgl2521 | Cgl1674 | cg2778 | cg1884 | Conserved hypothetical protein. | Putative membrane protein. | 0.980 |
Cgl2521 | Cgl2971 | cg2778 | cg3292 | Conserved hypothetical protein. | Copper chaperone. | 0.794 |
Cgl2521 | Cgl2977 | cg2778 | cg3300 | Conserved hypothetical protein. | Cation transport ATPase. | 0.795 |
Cgl2521 | Cgl3081 | cg2778 | cg3411 | Conserved hypothetical protein. | Copper chaperone. | 0.790 |
Cgl2521 | pth2 | cg2778 | cg1067 | Conserved hypothetical protein. | PEPTIDYL-TRNA HYDROLASE; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.981 |
Cgl2971 | Cgl1674 | cg3292 | cg1884 | Copper chaperone. | Putative membrane protein. | 0.804 |
Cgl2971 | Cgl2521 | cg3292 | cg2778 | Copper chaperone. | Conserved hypothetical protein. | 0.794 |
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