Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl0985 | Cgl0987 | cg1122 | cg1125 | Putative secreted protein. | Conserved hypothetical protein. | 0.592 |
| Cgl0985 | embC | cg1122 | cg0235 | Putative secreted protein. | Probable arabinosyltransferase, membrane protein. | 0.550 |
| Cgl0985 | gpt | cg1122 | cg1659 | Putative secreted protein. | PURINE PHOSPHORIBOSYLTRANSFERASE. | 0.706 |
| Cgl0985 | greA | cg1122 | cg1123 | Putative secreted protein. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.843 |
| Cgl0985 | mca | cg1122 | cg1127 | Putative secreted protein. | Uncharacterized proteins, LmbE homolog; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.480 |
| Cgl0985 | odhI | cg1122 | cg1630 | Putative secreted protein. | PUTATIVE SIGNAL TRANSDUCTION PROTEIN, FHA DOMAIN; An essential component of the PknG signaling pathway. When unphosphorylated, it inhibits the activity of 2-oxoglutarate dehydrogenase. When phosphorylated it does not inhibit 2-oxoglutarate dehydrogenase. | 0.750 |
| Cgl0985 | pknB | cg1122 | cg0057 | Putative secreted protein. | EUKARYOTIC-TYPE SERINE/THREONINE KINASE; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.475 |
| Cgl0985 | pknL | cg1122 | cg2388 | Putative secreted protein. | PUTATIVE SERINE/THREONINE PROTEIN KINASE. | 0.476 |
| Cgl0985 | ppp | cg1122 | cg0062 | Putative secreted protein. | PROTEIN PHOSPHATASE. | 0.553 |
| Cgl0985 | wzz | cg1122 | cg0414 | Putative secreted protein. | Cell surface polysaccharide biosynthesis / Chain length determinant protein. | 0.524 |
| Cgl0987 | Cgl0985 | cg1125 | cg1122 | Conserved hypothetical protein. | Putative secreted protein. | 0.592 |
| Cgl0987 | greA | cg1125 | cg1123 | Conserved hypothetical protein. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.616 |
| Cgl0987 | mca | cg1125 | cg1127 | Conserved hypothetical protein. | Uncharacterized proteins, LmbE homolog; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.552 |
| embC | Cgl0985 | cg0235 | cg1122 | Probable arabinosyltransferase, membrane protein. | Putative secreted protein. | 0.550 |
| gpt | Cgl0985 | cg1659 | cg1122 | PURINE PHOSPHORIBOSYLTRANSFERASE. | Putative secreted protein. | 0.706 |
| greA | Cgl0985 | cg1123 | cg1122 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Putative secreted protein. | 0.843 |
| greA | Cgl0987 | cg1123 | cg1125 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Conserved hypothetical protein. | 0.616 |
| greA | mca | cg1123 | cg1127 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Uncharacterized proteins, LmbE homolog; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.486 |
| mca | Cgl0985 | cg1127 | cg1122 | Uncharacterized proteins, LmbE homolog; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | Putative secreted protein. | 0.480 |
| mca | Cgl0987 | cg1127 | cg1125 | Uncharacterized proteins, LmbE homolog; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | Conserved hypothetical protein. | 0.552 |
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