Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0246 | Cgl1023 | cg0300 | cg1160 | Hypothetical tripeptide synthase involved in murein formation. | Similar to arabinose efflux permease. | 0.981 |
Cgl1021 | Cgl1023 | cg1159 | cg1160 | Putative secreted protein. | Similar to arabinose efflux permease. | 0.566 |
Cgl1023 | Cgl0246 | cg1160 | cg0300 | Similar to arabinose efflux permease. | Hypothetical tripeptide synthase involved in murein formation. | 0.981 |
Cgl1023 | Cgl1021 | cg1160 | cg1159 | Similar to arabinose efflux permease. | Putative secreted protein. | 0.566 |
Cgl1023 | xseA | cg1160 | cg1163 | Similar to arabinose efflux permease. | EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.482 |
Cgl1023 | xseB | cg1160 | cg1162 | Similar to arabinose efflux permease. | PUTATIVE EXODEOXYRIBONUCLEASE PROTEIN; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.524 |
xseA | Cgl1023 | cg1163 | cg1160 | EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | Similar to arabinose efflux permease. | 0.482 |
xseA | xseB | cg1163 | cg1162 | EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | PUTATIVE EXODEOXYRIBONUCLEASE PROTEIN; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.999 |
xseB | Cgl1023 | cg1162 | cg1160 | PUTATIVE EXODEOXYRIBONUCLEASE PROTEIN; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | Similar to arabinose efflux permease. | 0.524 |
xseB | xseA | cg1162 | cg1163 | PUTATIVE EXODEOXYRIBONUCLEASE PROTEIN; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.999 |