Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1096 | Cgl1097 | cg1246 | cg1247 | Conserved hypothetical protein. | Putative secreted protein. | 0.966 |
Cgl1096 | Cgl1098 | cg1246 | cg1248 | Conserved hypothetical protein. | GTPase involved in stress response. | 0.529 |
Cgl1096 | Cgl1099 | cg1246 | cg1249 | Conserved hypothetical protein. | ABC-type dipeptide/oligopeptide/nickel transport system, secreted component. | 0.788 |
Cgl1096 | Cgl1101 | cg1246 | cg1251 | Conserved hypothetical protein. | Putative membrane protein. | 0.506 |
Cgl1096 | Cgl1104 | cg1246 | cg1254 | Conserved hypothetical protein. | Putative membrane protein. | 0.687 |
Cgl1096 | mshB | cg1246 | cg1250 | Conserved hypothetical protein. | Uncharacterized proteins, LmbE homolog; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.486 |
Cgl1097 | Cgl1096 | cg1247 | cg1246 | Putative secreted protein. | Conserved hypothetical protein. | 0.966 |
Cgl1097 | Cgl1098 | cg1247 | cg1248 | Putative secreted protein. | GTPase involved in stress response. | 0.529 |
Cgl1097 | Cgl1099 | cg1247 | cg1249 | Putative secreted protein. | ABC-type dipeptide/oligopeptide/nickel transport system, secreted component. | 0.489 |
Cgl1097 | Cgl1101 | cg1247 | cg1251 | Putative secreted protein. | Putative membrane protein. | 0.490 |
Cgl1097 | Cgl1104 | cg1247 | cg1254 | Putative secreted protein. | Putative membrane protein. | 0.544 |
Cgl1097 | Cgl1134 | cg1247 | cg1285 | Putative secreted protein. | Conserved hypothetical protein. | 0.497 |
Cgl1097 | Cgl1538 | cg1247 | cg1735 | Putative secreted protein. | Secreted cell wall-associated hydrolase (invasion-associated protein). | 0.553 |
Cgl1097 | Cgl2187 | cg1247 | cg2401 | Putative secreted protein. | SECRETED PROTEIN NLP/P60 FAMILY, PUTATIVE PEPTIDOGLYCAN LYTIC PROTEIN. | 0.539 |
Cgl1097 | ftsW | cg1247 | cg2370 | Putative secreted protein. | Bacterial cell division membrane protein; Belongs to the SEDS family. | 0.490 |
Cgl1097 | mshB | cg1247 | cg1250 | Putative secreted protein. | Uncharacterized proteins, LmbE homolog; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.485 |
Cgl1098 | Cgl1096 | cg1248 | cg1246 | GTPase involved in stress response. | Conserved hypothetical protein. | 0.529 |
Cgl1098 | Cgl1097 | cg1248 | cg1247 | GTPase involved in stress response. | Putative secreted protein. | 0.529 |
Cgl1098 | Cgl1099 | cg1248 | cg1249 | GTPase involved in stress response. | ABC-type dipeptide/oligopeptide/nickel transport system, secreted component. | 0.776 |
Cgl1098 | Cgl1101 | cg1248 | cg1251 | GTPase involved in stress response. | Putative membrane protein. | 0.693 |
page 1 of 3