STRINGSTRING
lipT lipT lip lip Cgl1134 Cgl1134 Cgl1135 Cgl1135 rpsD rpsD rpsA rpsA Cgl1131 Cgl1131 rpsK rpsK odhA odhA pgp2 pgp2 aroE2 aroE2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipTTYPE B CARBOXYLESTERASE; Belongs to the type-B carboxylesterase/lipase family. (559 aa)    
Predicted Functional Partners:
lip
PUTATIVE LIPASE.
   
  
 0.963
Cgl1134
Conserved hypothetical protein.
  
    0.845
Cgl1135
Conserved hypothetical protein.
  
    0.671
rpsD
RIBOSOMAL PROTEIN S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
    
  0.625
rpsA
30S RIBOSOMAL PROTEIN S1.
   
 
  0.608
Cgl1131
Conserved hypothetical protein.
  
    0.590
rpsK
RIBOSOMAL PROTEIN S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
    
  0.554
odhA
2-OXOGLUTARATE DEHYDROGENASE; Catalyzes the E1 and E2 reactions as part of 2-oxoglutarate dehydrogenase (ODH) activity, to convert 2-oxoglutarate to succinyl-CoA and CO(2). OdhA has reductase activity with 2-oxoglutarate but does not react with pyruvate, and also displays transsuccinylase but no transacetylase activity. Since OdhA is not lipoylated, the succinyltransferase activity of its E2 domain is dependent on lipoyl residues of the acetyltransferase AceF.
     
 0.540
pgp2
PREDICTED PHOSPHATASE, HAD FAMILY.
  
    0.533
aroE2
PUTATIVE SHIKIMATE / QUINATE 5-DEHYDROGENASE.
  
    0.528
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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