STRINGSTRING
Cgl1214 Cgl1214 nucS nucS Cgl1216 Cgl1216 Cgl2131 Cgl2131 uspA1 uspA1 Cgl3088 Cgl3088 dnaN dnaN Cgl1906 Cgl1906 Cgl2498 Cgl2498 Cgl0468 Cgl0468 recB recB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1214Conserved hypothetical protein. (157 aa)    
Predicted Functional Partners:
nucS
Predicted nuclease of the RecB family; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
  
 0.995
Cgl1216
Conserved hypothetical protein.
     
 0.995
Cgl2131
Predicted permease.
      
 0.960
uspA1
Universal stress protein UspA and related nucleotide-binding proteins.
   
  
 0.917
Cgl3088
Uncharacterized membrane protein, virulence factor homolog.
  
   
 0.725
dnaN
DNA POLYMERASE III, BETA SUBUNIT; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
      
 0.700
Cgl1906
Putative membrane protein.
  
    0.694
Cgl2498
Putative membrane protein.
  
     0.675
Cgl0468
Conserved hypothetical membrane protein.
  
     0.651
recB
RecB family exonuclease.
   
  
 0.641
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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