Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1318 | Cgl1319 | cg1490 | cg1491 | NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Hypothetical protein predicted by Glimmer/Critica. | 0.552 |
Cgl1318 | ddlA | cg1490 | cg1493 | NTP pyrophosphohydrolases including oxidative damage repair enzymes. | D-ALANINE--D-ALANINE LIGASE A; Cell wall formation. | 0.604 |
Cgl1318 | gpsA | cg1490 | cg1492 | NTP pyrophosphohydrolases including oxidative damage repair enzymes. | GLYCEROL-3-PHOSPHATE DEHYDROGENASE (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.648 |
Cgl1319 | Cgl1318 | cg1491 | cg1490 | Hypothetical protein predicted by Glimmer/Critica. | NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.552 |
Cgl1319 | ddlA | cg1491 | cg1493 | Hypothetical protein predicted by Glimmer/Critica. | D-ALANINE--D-ALANINE LIGASE A; Cell wall formation. | 0.574 |
Cgl1319 | gpsA | cg1491 | cg1492 | Hypothetical protein predicted by Glimmer/Critica. | GLYCEROL-3-PHOSPHATE DEHYDROGENASE (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.636 |
ddlA | Cgl1318 | cg1493 | cg1490 | D-ALANINE--D-ALANINE LIGASE A; Cell wall formation. | NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.604 |
ddlA | Cgl1319 | cg1493 | cg1491 | D-ALANINE--D-ALANINE LIGASE A; Cell wall formation. | Hypothetical protein predicted by Glimmer/Critica. | 0.574 |
ddlA | gpsA | cg1493 | cg1492 | D-ALANINE--D-ALANINE LIGASE A; Cell wall formation. | GLYCEROL-3-PHOSPHATE DEHYDROGENASE (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.830 |
gpsA | Cgl1318 | cg1492 | cg1490 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.648 |
gpsA | Cgl1319 | cg1492 | cg1491 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Hypothetical protein predicted by Glimmer/Critica. | 0.636 |
gpsA | ddlA | cg1492 | cg1493 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | D-ALANINE--D-ALANINE LIGASE A; Cell wall formation. | 0.830 |