Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1354 | Cgl1355 | cg1526 | cg1527 | Permease of the major facilitator superfamily. | Predicted transcriptional regulators; Unnamed protein product. | 0.564 |
Cgl1354 | Cgl2743 | cg1526 | cg3038 | Permease of the major facilitator superfamily. | Permease of the major facilitator superfamilyynebacterium glutamicum]. | 0.478 |
Cgl1354 | dkgX | cg1526 | cg1528 | Permease of the major facilitator superfamily. | Putative 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE. | 0.564 |
Cgl1354 | ltsA | cg1526 | cg2410 | Permease of the major facilitator superfamily. | Asparagine synthase (Glutamine-hydrolyzing) or lysozyme insensitivity protein LtsA; Glutamine-dependent amidotransferase involved in formation of cell wall and L-glutamate biosynthesis. | 0.581 |
Cgl1355 | Cgl1354 | cg1527 | cg1526 | Predicted transcriptional regulators; Unnamed protein product. | Permease of the major facilitator superfamily. | 0.564 |
Cgl1355 | dkgX | cg1527 | cg1528 | Predicted transcriptional regulators; Unnamed protein product. | Putative 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE. | 0.777 |
Cgl2743 | Cgl1354 | cg3038 | cg1526 | Permease of the major facilitator superfamilyynebacterium glutamicum]. | Permease of the major facilitator superfamily. | 0.478 |
dkgX | Cgl1354 | cg1528 | cg1526 | Putative 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE. | Permease of the major facilitator superfamily. | 0.564 |
dkgX | Cgl1355 | cg1528 | cg1527 | Putative 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE. | Predicted transcriptional regulators; Unnamed protein product. | 0.777 |
ltsA | Cgl1354 | cg2410 | cg1526 | Asparagine synthase (Glutamine-hydrolyzing) or lysozyme insensitivity protein LtsA; Glutamine-dependent amidotransferase involved in formation of cell wall and L-glutamate biosynthesis. | Permease of the major facilitator superfamily. | 0.581 |