Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl1363 | Cgl1365 | cg1541 | cg1545 | Hypothetical protein predicted by Glimmer/Critica. | Permease of the major facilitator superfamily. | 0.411 |
| Cgl1363 | ccpA1 | cg1541 | cg1547 | Hypothetical protein predicted by Glimmer/Critica. | PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. | 0.402 |
| Cgl1363 | cg1542 | cg1541 | cg1542 | Hypothetical protein predicted by Glimmer/Critica. | Putative membrane protein. | 0.774 |
| Cgl1363 | iunH3 | cg1541 | cg1543 | Hypothetical protein predicted by Glimmer/Critica. | INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE. | 0.465 |
| Cgl1363 | rbsK1 | cg1541 | cg1546 | Hypothetical protein predicted by Glimmer/Critica. | PUTATIVE RIBOKINASE PROTEIN; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.401 |
| Cgl1365 | Cgl1363 | cg1545 | cg1541 | Permease of the major facilitator superfamily. | Hypothetical protein predicted by Glimmer/Critica. | 0.411 |
| Cgl1365 | ccpA1 | cg1545 | cg1547 | Permease of the major facilitator superfamily. | PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. | 0.948 |
| Cgl1365 | cg1542 | cg1545 | cg1542 | Permease of the major facilitator superfamily. | Putative membrane protein. | 0.414 |
| Cgl1365 | iunH3 | cg1545 | cg1543 | Permease of the major facilitator superfamily. | INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE. | 0.994 |
| Cgl1365 | rbsK1 | cg1545 | cg1546 | Permease of the major facilitator superfamily. | PUTATIVE RIBOKINASE PROTEIN; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.940 |
| ccpA1 | Cgl1363 | cg1547 | cg1541 | PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. | Hypothetical protein predicted by Glimmer/Critica. | 0.402 |
| ccpA1 | Cgl1365 | cg1547 | cg1545 | PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. | Permease of the major facilitator superfamily. | 0.948 |
| ccpA1 | cg1542 | cg1547 | cg1542 | PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. | Putative membrane protein. | 0.405 |
| ccpA1 | iunH3 | cg1547 | cg1543 | PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. | INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE. | 0.865 |
| ccpA1 | rbsK1 | cg1547 | cg1546 | PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. | PUTATIVE RIBOKINASE PROTEIN; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.848 |
| cg1542 | Cgl1363 | cg1542 | cg1541 | Putative membrane protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.774 |
| cg1542 | Cgl1365 | cg1542 | cg1545 | Putative membrane protein. | Permease of the major facilitator superfamily. | 0.414 |
| cg1542 | ccpA1 | cg1542 | cg1547 | Putative membrane protein. | PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. | 0.405 |
| cg1542 | iunH3 | cg1542 | cg1543 | Putative membrane protein. | INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE. | 0.464 |
| cg1542 | rbsK1 | cg1542 | cg1546 | Putative membrane protein. | PUTATIVE RIBOKINASE PROTEIN; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.403 |
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