Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1402 | Cgl1403 | cg1589 | cg1590 | Putative secreted protein. | Secreted Mg-chelatase subunit. | 0.961 |
Cgl1402 | Cgl1404 | cg1589 | cg1591 | Putative secreted protein. | Putative secreted protein. | 0.839 |
Cgl1402 | Cgl1405 | cg1589 | cg1592 | Putative secreted protein. | Conserved hypothetical protein; Belongs to the UPF0434 family. | 0.732 |
Cgl1402 | Cgl2435 | cg1589 | cg2674 | Putative secreted protein. | Alkylhydroperoxidase AhpD family core domain; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.746 |
Cgl1402 | argG | cg1589 | cg1586 | Putative secreted protein. | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.611 |
Cgl1402 | argH | cg1589 | cg1588 | Putative secreted protein. | ARGININOSUCCINATE LYASE. | 0.699 |
Cgl1402 | cysD | cg1589 | cg3115 | Putative secreted protein. | Sulfate Adenylyltransferase Subunit 2. | 0.561 |
Cgl1402 | cysH | cg1589 | cg3116 | Putative secreted protein. | Phosphoadenosine-Phosphosulfate Reductase; Reduction of activated sulfate into sulfite. | 0.561 |
Cgl1402 | cysN | cg1589 | cg3114 | Putative secreted protein. | Sulfate Adenyltransferase Subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.810 |
Cgl1402 | tyrS | cg1589 | cg1594 | Putative secreted protein. | TYROSYL-TRNA SYNTHETASE; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.683 |
Cgl1403 | Cgl1402 | cg1590 | cg1589 | Secreted Mg-chelatase subunit. | Putative secreted protein. | 0.961 |
Cgl1403 | Cgl1404 | cg1590 | cg1591 | Secreted Mg-chelatase subunit. | Putative secreted protein. | 0.838 |
Cgl1403 | Cgl1405 | cg1590 | cg1592 | Secreted Mg-chelatase subunit. | Conserved hypothetical protein; Belongs to the UPF0434 family. | 0.732 |
Cgl1403 | argG | cg1590 | cg1586 | Secreted Mg-chelatase subunit. | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.611 |
Cgl1403 | argH | cg1590 | cg1588 | Secreted Mg-chelatase subunit. | ARGININOSUCCINATE LYASE. | 0.699 |
Cgl1403 | tyrS | cg1590 | cg1594 | Secreted Mg-chelatase subunit. | TYROSYL-TRNA SYNTHETASE; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.683 |
Cgl1404 | Cgl1402 | cg1591 | cg1589 | Putative secreted protein. | Putative secreted protein. | 0.839 |
Cgl1404 | Cgl1403 | cg1591 | cg1590 | Putative secreted protein. | Secreted Mg-chelatase subunit. | 0.838 |
Cgl1404 | Cgl1405 | cg1591 | cg1592 | Putative secreted protein. | Conserved hypothetical protein; Belongs to the UPF0434 family. | 0.735 |
Cgl1404 | argG | cg1591 | cg1586 | Putative secreted protein. | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.615 |
page 1 of 4