Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1729 | cg1948 | cg1947 | cg1948 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein predicted by Glimmer. | 0.471 |
cg1948 | Cgl1729 | cg1948 | cg1947 | Hypothetical protein predicted by Glimmer. | Hypothetical protein predicted by Glimmer/Critica. | 0.471 |
cg1948 | ssiE | cg1948 | cg1151 | Hypothetical protein predicted by Glimmer. | PUTATIVE MONOOXYGENASE. | 0.474 |
cg1948 | ssiF | cg1948 | cg1152 | Hypothetical protein predicted by Glimmer. | PUTATIVE MONOXYGENASE. | 0.478 |
cg1948 | ssiG | cg1948 | cg1153 | Hypothetical protein predicted by Glimmer. | PUTATIVE MONOXYGENASE. | 0.471 |
cg1948 | ssuB | cg1948 | cg1379 | Hypothetical protein predicted by Glimmer. | ALIPHATIC SULFONATES ATP-BINDING ABC TRANSPORTERPROTEIN; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system (Probable). Is also involved in taurine transport. Seems to not be involved in long chain aliphatic sulfonates transport (chain length of eight carbon atoms or more). | 0.714 |
cg1948 | ssuC | cg1948 | cg1377 | Hypothetical protein predicted by Glimmer. | ALIPHATIC SULFONATES TRANSMEMBRANE ABC TRANSPORTERPROTEIN. | 0.470 |
cg1948 | ssuD1 | cg1948 | cg1376 | Hypothetical protein predicted by Glimmer. | Alkanesulfonate monoxygenase. | 0.470 |
ssiE | cg1948 | cg1151 | cg1948 | PUTATIVE MONOOXYGENASE. | Hypothetical protein predicted by Glimmer. | 0.474 |
ssiE | ssiF | cg1151 | cg1152 | PUTATIVE MONOOXYGENASE. | PUTATIVE MONOXYGENASE. | 0.997 |
ssiE | ssiG | cg1151 | cg1153 | PUTATIVE MONOOXYGENASE. | PUTATIVE MONOXYGENASE. | 0.993 |
ssiE | ssuB | cg1151 | cg1379 | PUTATIVE MONOOXYGENASE. | ALIPHATIC SULFONATES ATP-BINDING ABC TRANSPORTERPROTEIN; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system (Probable). Is also involved in taurine transport. Seems to not be involved in long chain aliphatic sulfonates transport (chain length of eight carbon atoms or more). | 0.920 |
ssiE | ssuC | cg1151 | cg1377 | PUTATIVE MONOOXYGENASE. | ALIPHATIC SULFONATES TRANSMEMBRANE ABC TRANSPORTERPROTEIN. | 0.945 |
ssiE | ssuD1 | cg1151 | cg1376 | PUTATIVE MONOOXYGENASE. | Alkanesulfonate monoxygenase. | 0.978 |
ssiF | cg1948 | cg1152 | cg1948 | PUTATIVE MONOXYGENASE. | Hypothetical protein predicted by Glimmer. | 0.478 |
ssiF | ssiE | cg1152 | cg1151 | PUTATIVE MONOXYGENASE. | PUTATIVE MONOOXYGENASE. | 0.997 |
ssiF | ssiG | cg1152 | cg1153 | PUTATIVE MONOXYGENASE. | PUTATIVE MONOXYGENASE. | 0.941 |
ssiF | ssuB | cg1152 | cg1379 | PUTATIVE MONOXYGENASE. | ALIPHATIC SULFONATES ATP-BINDING ABC TRANSPORTERPROTEIN; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system (Probable). Is also involved in taurine transport. Seems to not be involved in long chain aliphatic sulfonates transport (chain length of eight carbon atoms or more). | 0.884 |
ssiF | ssuC | cg1152 | cg1377 | PUTATIVE MONOXYGENASE. | ALIPHATIC SULFONATES TRANSMEMBRANE ABC TRANSPORTERPROTEIN. | 0.896 |
ssiF | ssuD1 | cg1152 | cg1376 | PUTATIVE MONOXYGENASE. | Alkanesulfonate monoxygenase. | 0.958 |
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