STRINGSTRING
cg1948 cg1948 ssuB ssuB ssiF ssiF ssiE ssiE ssiG ssiG Cgl1729 Cgl1729 ssuD1 ssuD1 ssuC ssuC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
cg1948Hypothetical protein predicted by Glimmer. (48 aa)    
Predicted Functional Partners:
ssuB
ALIPHATIC SULFONATES ATP-BINDING ABC TRANSPORTERPROTEIN; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system (Probable). Is also involved in taurine transport. Seems to not be involved in long chain aliphatic sulfonates transport (chain length of eight carbon atoms or more).
   
    0.714
ssiF
PUTATIVE MONOXYGENASE.
   
    0.478
ssiE
PUTATIVE MONOOXYGENASE.
   
    0.474
ssiG
PUTATIVE MONOXYGENASE.
   
    0.471
Cgl1729
Hypothetical protein predicted by Glimmer/Critica.
  
    0.471
ssuD1
Alkanesulfonate monoxygenase.
   
    0.470
ssuC
ALIPHATIC SULFONATES TRANSMEMBRANE ABC TRANSPORTERPROTEIN.
   
    0.470
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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