STRINGSTRING
Cgl1817 Cgl1817 Cgl1818 Cgl1818 rpi rpi actA actA gpmA gpmA Cgl0181 Cgl0181 dapD dapD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1817Conserved hypothetical protein. (607 aa)    
Predicted Functional Partners:
Cgl1818
Hypothetical protein predicted by Glimmer.
  
  
 0.988
rpi
POSSIBLE PHOSPHOPENTOSE ISOMERASE.
   
  
 0.700
actA
BUTYRYL-COA:ACETATE COENZYME A TRANSFERASE.
      
 0.606
gpmA
PHOSPHOGLYCEROMUTASE 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
  
 0.453
Cgl0181
METABOLITE TRANSPORT PROTEIN; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.451
dapD
TETRAHYDRODIPICOLINATE SUCCINYLASE; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
      
 0.410
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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