STRINGSTRING
Cgl1965 Cgl1965 cg2156 cg2156 Cgl1963 Cgl1963 pgsA2 pgsA2 Cgl1962 Cgl1962 Cgl1961 Cgl1961 Cgl1204 Cgl1204 Cgl2906 Cgl2906 Cgl0396 Cgl0396 rpf1 rpf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1965Conserved hypothetical protein. (95 aa)    
Predicted Functional Partners:
cg2156
Hypothetical protein.
  
    0.707
Cgl1963
Similar to competence-and mitomycin-induced protein; Belongs to the CinA family.
       0.653
pgsA2
CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.653
Cgl1962
Predicted transcriptional regulator.
  
    0.588
Cgl1961
Similar to phage shock protein A.
       0.481
Cgl1204
Putative membrane protein.
  
    0.473
Cgl2906
Conserved hypothetical protein.
 
     0.422
Cgl0396
Conserved hypothetical protein.
  
    0.405
rpf1
PUTATIVE RPF PROTEIN PRECURSOR; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity).
  
  
 0.401
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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