node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gpsI | nusA | cg2166 | cg2178 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | PUTATIVE TRANSCRIPTIONAL TERMINATION/ANTITERMINATION FACTOR; Participates in both transcription termination and antitermination. | 0.882 |
gpsI | pcnA | cg2166 | cg3415 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | POLYA POLYMERASE; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.859 |
gpsI | rho | cg2166 | cg1354 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.887 |
gpsI | rnc | cg2166 | cg2273 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | RIBONUCLEASE III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.857 |
gpsI | rne | cg2166 | cg2597 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | PROBABLE RIBONUCLEASE E (RNASE E) PROTEIN. | 0.914 |
gpsI | rnj | cg2166 | cg2160 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | HYDROLASE OF METALLO-BETA-LACTAMASE SUPERFAMILY; An RNase that has 5'-3' exonuclease and possibly endoonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay (By similarity). Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. | 0.991 |
gpsI | rph | cg2166 | cg2753 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | PROBABLE RIBONUCLEASE PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.877 |
gpsI | rpoA | cg2166 | cg0655 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | DNA-DIRECTED RNA POLYMERASE ALPHA SUBUNIT; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.837 |
gpsI | rpsO | cg2166 | cg2167 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | RIBOSOMAL PROTEIN S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.897 |
gpsI | ybeY | cg2166 | cg2512 | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.984 |
nusA | gpsI | cg2178 | cg2166 | PUTATIVE TRANSCRIPTIONAL TERMINATION/ANTITERMINATION FACTOR; Participates in both transcription termination and antitermination. | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.882 |
nusA | rho | cg2178 | cg1354 | PUTATIVE TRANSCRIPTIONAL TERMINATION/ANTITERMINATION FACTOR; Participates in both transcription termination and antitermination. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.858 |
nusA | rnc | cg2178 | cg2273 | PUTATIVE TRANSCRIPTIONAL TERMINATION/ANTITERMINATION FACTOR; Participates in both transcription termination and antitermination. | RIBONUCLEASE III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.517 |
nusA | rpoA | cg2178 | cg0655 | PUTATIVE TRANSCRIPTIONAL TERMINATION/ANTITERMINATION FACTOR; Participates in both transcription termination and antitermination. | DNA-DIRECTED RNA POLYMERASE ALPHA SUBUNIT; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.981 |
nusA | rpsO | cg2178 | cg2167 | PUTATIVE TRANSCRIPTIONAL TERMINATION/ANTITERMINATION FACTOR; Participates in both transcription termination and antitermination. | RIBOSOMAL PROTEIN S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.636 |
pcnA | gpsI | cg3415 | cg2166 | POLYA POLYMERASE; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | PUTATIVE POLYRIBONUCLEOTIDE PHOSPHORYLASE / GUANOSINE PENTAPHOSPHATESYNTHETASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.859 |
pcnA | rne | cg3415 | cg2597 | POLYA POLYMERASE; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | PROBABLE RIBONUCLEASE E (RNASE E) PROTEIN. | 0.431 |
pcnA | rnj | cg3415 | cg2160 | POLYA POLYMERASE; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | HYDROLASE OF METALLO-BETA-LACTAMASE SUPERFAMILY; An RNase that has 5'-3' exonuclease and possibly endoonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay (By similarity). Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. | 0.692 |
pcnA | rph | cg3415 | cg2753 | POLYA POLYMERASE; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | PROBABLE RIBONUCLEASE PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.832 |
pcnA | ybeY | cg3415 | cg2512 | POLYA POLYMERASE; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.748 |