Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1021 | Cgl1057 | cg1159 | cg1203 | Putative secreted protein. | Mg-chelatase subunit ChlI. | 0.550 |
Cgl1021 | Cgl1997 | cg1159 | cg2188 | Putative secreted protein. | Mg-chelatase subunit I. | 0.550 |
Cgl1057 | Cgl1021 | cg1203 | cg1159 | Mg-chelatase subunit ChlI. | Putative secreted protein. | 0.550 |
Cgl1057 | Cgl1446 | cg1203 | cg1636 | Mg-chelatase subunit ChlI. | Putative secreted protein. | 0.550 |
Cgl1057 | Cgl1996 | cg1203 | cg2187 | Mg-chelatase subunit ChlI. | Mg-chelatase subunit D. | 0.550 |
Cgl1057 | Cgl1997 | cg1203 | cg2188 | Mg-chelatase subunit ChlI. | Mg-chelatase subunit I. | 0.900 |
Cgl1057 | Cgl3013 | cg1203 | cg3341 | Mg-chelatase subunit ChlI. | Putative membrane protein. | 0.550 |
Cgl1057 | Cgl3014 | cg1203 | cg3342 | Mg-chelatase subunit ChlI. | Putative secreted protein. | 0.550 |
Cgl1057 | hemH | cg1203 | cg1734 | Mg-chelatase subunit ChlI. | FERROCHELATASE PRECURSOR; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.910 |
Cgl1057 | hemY | cg1203 | cg0517 | Mg-chelatase subunit ChlI. | PUTATIVE PROTOPORPHYRINOGEN OXIDASE; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.913 |
Cgl1057 | ruvC | cg1203 | cg1871 | Mg-chelatase subunit ChlI. | CROSSOVER JUNCTION ENDODEOXYRIBONUCLEASE; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.721 |
Cgl1446 | Cgl1057 | cg1636 | cg1203 | Putative secreted protein. | Mg-chelatase subunit ChlI. | 0.550 |
Cgl1446 | Cgl1997 | cg1636 | cg2188 | Putative secreted protein. | Mg-chelatase subunit I. | 0.550 |
Cgl1996 | Cgl1057 | cg2187 | cg1203 | Mg-chelatase subunit D. | Mg-chelatase subunit ChlI. | 0.550 |
Cgl1996 | Cgl1997 | cg2187 | cg2188 | Mg-chelatase subunit D. | Mg-chelatase subunit I. | 0.997 |
Cgl1996 | cobL | cg2187 | cg1678 | Mg-chelatase subunit D. | PRECORRIN-6Y C5,15-METHYLTRANSFERASE (DECARBOXYLATING). | 0.564 |
Cgl1997 | Cgl1021 | cg2188 | cg1159 | Mg-chelatase subunit I. | Putative secreted protein. | 0.550 |
Cgl1997 | Cgl1057 | cg2188 | cg1203 | Mg-chelatase subunit I. | Mg-chelatase subunit ChlI. | 0.900 |
Cgl1997 | Cgl1446 | cg2188 | cg1636 | Mg-chelatase subunit I. | Putative secreted protein. | 0.550 |
Cgl1997 | Cgl1996 | cg2188 | cg2187 | Mg-chelatase subunit I. | Mg-chelatase subunit D. | 0.997 |
page 1 of 3