Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl1746 | Cgl2004 | cg1966 | cg2195 | Hypothetical protein predicted by Glimmer/Critica. | Putative secreted or membrane protein. | 0.689 |
| Cgl2004 | Cgl1746 | cg2195 | cg1966 | Putative secreted or membrane protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.689 |
| Cgl2004 | Cgl2005 | cg2195 | cg2196 | Putative secreted or membrane protein. | Putative secreted or membrane protein. | 0.683 |
| Cgl2004 | Cgl2006 | cg2195 | cg2197 | Putative secreted or membrane protein. | Putative membrane protein. | 0.408 |
| Cgl2004 | aroE | cg2195 | cg0504 | Putative secreted or membrane protein. | PUTATIVE SHIKIMATE 5-DEHYDROGENASE PROTEIN; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids, and plays a key role in the quinate degradation pathway. Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3- dehydroshikimate, respectively. It can only use NAD. | 0.603 |
| Cgl2004 | aroE2 | cg2195 | cg1283 | Putative secreted or membrane protein. | PUTATIVE SHIKIMATE / QUINATE 5-DEHYDROGENASE. | 0.604 |
| Cgl2004 | aroE3 | cg2195 | cg1835 | Putative secreted or membrane protein. | PROBABLE SHIKIMATE 5-DEHYDROGENASE PROTEIN. | 0.491 |
| Cgl2004 | catB | cg2195 | cg2635 | Putative secreted or membrane protein. | CHLOROMUCONATE CYCLOISOMERASE; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.799 |
| Cgl2004 | pcaG | cg2195 | cg2630 | Putative secreted or membrane protein. | PROTOCATECHUATE DIOXYGENASE ALPHA SUBUNIT. | 0.773 |
| Cgl2005 | Cgl2004 | cg2196 | cg2195 | Putative secreted or membrane protein. | Putative secreted or membrane protein. | 0.683 |
| Cgl2005 | Cgl2006 | cg2196 | cg2197 | Putative secreted or membrane protein. | Putative membrane protein. | 0.525 |
| Cgl2006 | Cgl2004 | cg2197 | cg2195 | Putative membrane protein. | Putative secreted or membrane protein. | 0.408 |
| Cgl2006 | Cgl2005 | cg2197 | cg2196 | Putative membrane protein. | Putative secreted or membrane protein. | 0.525 |
| aroE | Cgl2004 | cg0504 | cg2195 | PUTATIVE SHIKIMATE 5-DEHYDROGENASE PROTEIN; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids, and plays a key role in the quinate degradation pathway. Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3- dehydroshikimate, respectively. It can only use NAD. | Putative secreted or membrane protein. | 0.603 |
| aroE | aroE2 | cg0504 | cg1283 | PUTATIVE SHIKIMATE 5-DEHYDROGENASE PROTEIN; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids, and plays a key role in the quinate degradation pathway. Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3- dehydroshikimate, respectively. It can only use NAD. | PUTATIVE SHIKIMATE / QUINATE 5-DEHYDROGENASE. | 0.936 |
| aroE | aroE3 | cg0504 | cg1835 | PUTATIVE SHIKIMATE 5-DEHYDROGENASE PROTEIN; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids, and plays a key role in the quinate degradation pathway. Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3- dehydroshikimate, respectively. It can only use NAD. | PROBABLE SHIKIMATE 5-DEHYDROGENASE PROTEIN. | 0.939 |
| aroE | catB | cg0504 | cg2635 | PUTATIVE SHIKIMATE 5-DEHYDROGENASE PROTEIN; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids, and plays a key role in the quinate degradation pathway. Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3- dehydroshikimate, respectively. It can only use NAD. | CHLOROMUCONATE CYCLOISOMERASE; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.770 |
| aroE | pcaG | cg0504 | cg2630 | PUTATIVE SHIKIMATE 5-DEHYDROGENASE PROTEIN; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids, and plays a key role in the quinate degradation pathway. Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3- dehydroshikimate, respectively. It can only use NAD. | PROTOCATECHUATE DIOXYGENASE ALPHA SUBUNIT. | 0.787 |
| aroE2 | Cgl2004 | cg1283 | cg2195 | PUTATIVE SHIKIMATE / QUINATE 5-DEHYDROGENASE. | Putative secreted or membrane protein. | 0.604 |
| aroE2 | aroE | cg1283 | cg0504 | PUTATIVE SHIKIMATE / QUINATE 5-DEHYDROGENASE. | PUTATIVE SHIKIMATE 5-DEHYDROGENASE PROTEIN; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids, and plays a key role in the quinate degradation pathway. Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3- dehydroshikimate, respectively. It can only use NAD. | 0.936 |
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