STRINGSTRING
Cgl2081 Cgl2081 Cgl0392 Cgl0392 Cgl2082 Cgl2082 hipO hipO Cgl0500 Cgl0500 Cgl0666 Cgl0666 Cgl1070 Cgl1070 Cgl0808 Cgl0808 Cgl0387 Cgl0387 ripA ripA Cgl0336 Cgl0336
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2081Conserved hypothetical protein. (132 aa)    
Predicted Functional Partners:
Cgl0392
Conserved secreted protein.
   
    0.817
Cgl2082
Galactose-1-phosphate uridylyltransferase.
       0.683
hipO
PUTATIVE HIPPURATE HYDROLASE PROTEIN.
       0.615
Cgl0500
ABC TRANSPORTER, NUCLEOTIDE BINDING/ATPASE PROTEIN.
   
    0.571
Cgl0666
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component.
   
    0.478
Cgl1070
ADP-ribose pyrophosphatase.
   
    0.478
Cgl0808
ABC-type cobalamin/Fe3+-siderophores transport system, secreted component.
   
    0.477
Cgl0387
Conserved hypothetical membrane protein.
   
    0.473
ripA
AraC-type DNA-binding domain-containing protein; Under iron limitation, RipA negatively controls the expression of the acn (aconitase), catA (catechol 1,2 dioxygenase), leuCD (isopropylmalate dehydratase), narKGHJI (nitrite/nitrate transporter and nitrate reductase), sdhCAB (succinate dehydrogenase), pta (phosphotransacetylase) and katA (catalase) genes. Binds to the consensus sequence in the promoter region.
   
    0.472
Cgl0336
cobalamin/Fe3+-siderophores transport system, secreted component.
   
    0.471
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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