STRINGSTRING
Cgl2119 Cgl2119 Cgl1177 Cgl1177 Cgl1313 Cgl1313 rnhB rnhB Cgl0295 Cgl0295 treY treY rel rel cg2325 cg2325 thrS thrS Cgl2116 Cgl2116 Cgl2117 Cgl2117
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2119Conserved hypothetical protein. (341 aa)    
Predicted Functional Partners:
Cgl1177
SIMILAR TO GTP PYROPHOSPHOKINASE.
  
  
 0.984
Cgl1313
Putative metal dependent phosphohydrolase, relA/spoT homolog.
   
  
 0.982
rnhB
PROBABLE RIBONUCLEASE HII PROTEIN; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
  
 0.982
Cgl0295
Pyrophosphohydrolase.
   
  
 0.964
treY
MALTOOLIGOSYL TREHALOSE SYNTHASE.
  
    0.752
rel
PPGPP SYNTHETASE, PPGPP PYROPHOSPHORYLASE; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the formation of pppGpp which is then hydrolyzed to form ppGpp. It also has (p)ppGpp-degrading activities.
      
 0.723
cg2325
Hypothetical protein predicted by Glimmer/Critica.
  
    0.654
thrS
THREONYL-TRNA SYNTHETASE; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
     
 0.638
Cgl2116
DNA polymerase III epsilon subunit or related 3'-5' exonuclease.
 
     0.626
Cgl2117
Conserved hypothetical protein.
       0.613
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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