STRINGSTRING
Cgl2140 Cgl2140 Cgl0175 Cgl0175 cg0232 cg0232 Cgl2147 Cgl2147 cg2828 cg2828 lspA lspA rluD rluD crcB crcB Cgl2137 Cgl2137 Cgl2141 Cgl2141
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2140Putative secreted protein. (334 aa)    
Predicted Functional Partners:
Cgl0175
Hypothetical membrane protein.
      
 0.981
cg0232
Hypothetical secreted protein.
      
 0.981
Cgl2147
Conserved hypothetical protein.
      
 0.981
cg2828
Putative membrane protein.
      
 0.694
lspA
LIPOPROTEIN SIGNAL PEPTIDASE; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
    0.656
rluD
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
    0.649
crcB
Membrane protein similar to CrcB involved in chromosome folding (N-terminal fragment); Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
      
 0.640
Cgl2137
Putative secreted protein.
  
    0.634
Cgl2141
ATPase component of ABC transporters with duplicated ATPase domains.
  
    0.520
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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