STRINGSTRING
Cgl2236 Cgl2236 Cgl2237 Cgl2237 cobS cobS Cgl2238 Cgl2238 cobT cobT rnhB rnhB polA polA ptpA ptpA pgp2 pgp2 ssb ssb Cgl2455 Cgl2455
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2236Ribonuclease HI. (382 aa)    
Predicted Functional Partners:
Cgl2237
Zn-ribbon protein, possibly nucleic acid-binding.
 
  
 0.967
cobS
PUTATIVE COBALAMIN (5'-PHOSPHATE) SYNTHASE; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.954
Cgl2238
Conserved hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
 
  
 0.945
cobT
PROBABLE NICOTINATE-NUCLEOTIDE-- DIMETHYLBENZIMIDAZOLEPHOSPHORIBOSYLTRANSFERASE PROTEIN; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
 
 
 0.944
rnhB
PROBABLE RIBONUCLEASE HII PROTEIN; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
 
 0.810
polA
DNA POLYMERASE I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.736
ptpA
PROTEIN-TYROSINE-PHOSPHATASE; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.656
pgp2
PREDICTED PHOSPHATASE, HAD FAMILY.
  
  
 0.644
ssb
SINGLE-STRANDED DNA-BINDING PROTEIN.
  
 
 0.622
Cgl2455
SINGLE-STRAND DNA BINDING PROTEIN.
   
 
 0.621
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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