STRINGSTRING
Cgl2237 Cgl2237 Cgl2236 Cgl2236 Cgl2238 Cgl2238 Cgl2241 Cgl2241 pgp2 pgp2 ptpA ptpA Cgl0121 Cgl0121 Cgl0379 Cgl0379 pvdS2 pvdS2 Cgl2839 Cgl2839 Cgl0973 Cgl0973
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2237Zn-ribbon protein, possibly nucleic acid-binding. (239 aa)    
Predicted Functional Partners:
Cgl2236
Ribonuclease HI.
 
  
 0.967
Cgl2238
Conserved hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
  
  
 0.927
Cgl2241
Putative membrane protein.
 
    0.666
pgp2
PREDICTED PHOSPHATASE, HAD FAMILY.
  
    0.661
ptpA
PROTEIN-TYROSINE-PHOSPHATASE; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
    0.647
Cgl0121
Bacterial regulatory proteins, Crp family.
   
  
 0.611
Cgl0379
TETR-FAMILY TRANSCRIPTIONAL REGULATOR.
      
 0.608
pvdS2
RNA POLYMERASE SIGMA FACTOR, PUTATIVE; Catalyzes the synthesis of polyP from ATP or GTP. Can also use inorganic polyphosphate (polyP) as a donor to convert ADP to ATP, but the activity is 10-fold higher in vitro for polyP synthesis than for ATP formation.
      
 0.607
Cgl2839
Putative membrane protein.
 
   
 0.558
Cgl0973
Conserved hypothetical protein.
  
     0.478
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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