Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0159 | Cgl2244 | cg0198 | cg2462 | Conserved hypothetical protein. | Bacterial regulatory proteins, TetR family. | 0.413 |
Cgl1236 | Cgl2244 | cg1393 | cg2462 | Acetyltransferase, GNAT family. | Bacterial regulatory proteins, TetR family. | 0.472 |
Cgl2244 | Cgl0159 | cg2462 | cg0198 | Bacterial regulatory proteins, TetR family. | Conserved hypothetical protein. | 0.413 |
Cgl2244 | Cgl1236 | cg2462 | cg1393 | Bacterial regulatory proteins, TetR family. | Acetyltransferase, GNAT family. | 0.472 |
Cgl2244 | Cgl2245 | cg2462 | cg2463 | Bacterial regulatory proteins, TetR family. | Hypothetical protein. | 0.746 |
Cgl2244 | Cgl2424 | cg2462 | cg2659 | Bacterial regulatory proteins, TetR family. | Putative membrane protein. | 0.465 |
Cgl2244 | tnp4a(ISCg4a) | cg2462 | cg2461 | Bacterial regulatory proteins, TetR family. | Transposase. | 0.422 |
Cgl2245 | Cgl2244 | cg2463 | cg2462 | Hypothetical protein. | Bacterial regulatory proteins, TetR family. | 0.746 |
Cgl2424 | Cgl2244 | cg2659 | cg2462 | Putative membrane protein. | Bacterial regulatory proteins, TetR family. | 0.465 |
tnp4a(ISCg4a) | Cgl2244 | cg2461 | cg2462 | Transposase. | Bacterial regulatory proteins, TetR family. | 0.422 |