Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl2217 | Cgl2314 | cg2432 | cg2542 | MUTT/NUDIX FAMILY PROTEIN. | Predicted permease. | 0.500 |
Cgl2313 | Cgl2314 | cg2540 | cg2542 | Putative secreted or membrane protein. | Predicted permease. | 0.785 |
Cgl2313 | Cgl2316 | cg2540 | cg2544 | Putative secreted or membrane protein. | Bacterial regulatory proteins, GntR family. | 0.545 |
Cgl2313 | ectP | cg2540 | cg2539 | Putative secreted or membrane protein. | Ectoine/proline/glycine betaine carrier EctP; Involved in the uptake of osmoprotectants. Can transport ectoine, proline and glycine betaine. Na(+) is probably the coupling ion; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.484 |
Cgl2313 | glcD | cg2540 | cg2543 | Putative secreted or membrane protein. | PROBABLE GLYCOLATE OXIDASE (FAD-LINKED SUBUNIT) OXIDOREDUCTASE. | 0.762 |
Cgl2314 | Cgl2217 | cg2542 | cg2432 | Predicted permease. | MUTT/NUDIX FAMILY PROTEIN. | 0.500 |
Cgl2314 | Cgl2313 | cg2542 | cg2540 | Predicted permease. | Putative secreted or membrane protein. | 0.785 |
Cgl2314 | Cgl2316 | cg2542 | cg2544 | Predicted permease. | Bacterial regulatory proteins, GntR family. | 0.559 |
Cgl2314 | Cgl2769 | cg2542 | cg3067 | Predicted permease. | Putative membrane protein. | 0.490 |
Cgl2314 | ectP | cg2542 | cg2539 | Predicted permease. | Ectoine/proline/glycine betaine carrier EctP; Involved in the uptake of osmoprotectants. Can transport ectoine, proline and glycine betaine. Na(+) is probably the coupling ion; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.480 |
Cgl2314 | glcD | cg2542 | cg2543 | Predicted permease. | PROBABLE GLYCOLATE OXIDASE (FAD-LINKED SUBUNIT) OXIDOREDUCTASE. | 0.791 |
Cgl2314 | mez | cg2542 | cg3335 | Predicted permease. | MALIC ENZYME. | 0.567 |
Cgl2316 | Cgl2313 | cg2544 | cg2540 | Bacterial regulatory proteins, GntR family. | Putative secreted or membrane protein. | 0.545 |
Cgl2316 | Cgl2314 | cg2544 | cg2542 | Bacterial regulatory proteins, GntR family. | Predicted permease. | 0.559 |
Cgl2316 | glcD | cg2544 | cg2543 | Bacterial regulatory proteins, GntR family. | PROBABLE GLYCOLATE OXIDASE (FAD-LINKED SUBUNIT) OXIDOREDUCTASE. | 0.579 |
Cgl2769 | Cgl2314 | cg3067 | cg2542 | Putative membrane protein. | Predicted permease. | 0.490 |
ectP | Cgl2313 | cg2539 | cg2540 | Ectoine/proline/glycine betaine carrier EctP; Involved in the uptake of osmoprotectants. Can transport ectoine, proline and glycine betaine. Na(+) is probably the coupling ion; Belongs to the BCCT transporter (TC 2.A.15) family. | Putative secreted or membrane protein. | 0.484 |
ectP | Cgl2314 | cg2539 | cg2542 | Ectoine/proline/glycine betaine carrier EctP; Involved in the uptake of osmoprotectants. Can transport ectoine, proline and glycine betaine. Na(+) is probably the coupling ion; Belongs to the BCCT transporter (TC 2.A.15) family. | Predicted permease. | 0.480 |
ectP | glcD | cg2539 | cg2543 | Ectoine/proline/glycine betaine carrier EctP; Involved in the uptake of osmoprotectants. Can transport ectoine, proline and glycine betaine. Na(+) is probably the coupling ion; Belongs to the BCCT transporter (TC 2.A.15) family. | PROBABLE GLYCOLATE OXIDASE (FAD-LINKED SUBUNIT) OXIDOREDUCTASE. | 0.508 |
glcD | Cgl2313 | cg2543 | cg2540 | PROBABLE GLYCOLATE OXIDASE (FAD-LINKED SUBUNIT) OXIDOREDUCTASE. | Putative secreted or membrane protein. | 0.762 |
page 1 of 2