STRINGSTRING
Cgl2345 Cgl2345 dinF dinF Cgl2344 Cgl2344 Cgl2346 Cgl2346 Cgl2348 Cgl2348 Cgl2347 Cgl2347 Cgl1312 Cgl1312 xseA xseA Cgl2055 Cgl2055 Cgl2349 Cgl2349 Cgl0739 Cgl0739
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2345Ankyrin repeat protein. (133 aa)    
Predicted Functional Partners:
dinF
PUTATIVE DNA-DAMAGE-INDUCIBLE MEMBRANE PROTEIN.
   
 
 0.962
Cgl2344
LysE type translocator.
  
    0.835
Cgl2346
Putative DNA polymerase III delta subunit.
  
    0.775
Cgl2348
Secreted DNA uptake protein or related DNA-binding protein.
  
    0.774
Cgl2347
Predicted multitransmembrane, metal-binding protein.
  
    0.773
Cgl1312
Putative secreted protein.
   
 0.722
xseA
EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
   
  
 0.707
Cgl2055
Ankyrin repeat protein.
  
    0.676
Cgl2349
Protein DegV family; Binds long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
  
    0.661
Cgl0739
Superfamily II DNA/RNA helicase, SNF2 family.
   
 0.642
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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