Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl0005 | Cgl2346 | cg0006 | cg2576 | CONSERVED HYPOTHETICAL PROTEIN; Belongs to the UPF0232 family. | Putative DNA polymerase III delta subunit. | 0.929 |
| Cgl0005 | Cgl3088 | cg0006 | cg3419 | CONSERVED HYPOTHETICAL PROTEIN; Belongs to the UPF0232 family. | Uncharacterized membrane protein, virulence factor homolog. | 0.980 |
| Cgl0005 | dnaN | cg0006 | cg0004 | CONSERVED HYPOTHETICAL PROTEIN; Belongs to the UPF0232 family. | DNA POLYMERASE III, BETA SUBUNIT; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.887 |
| Cgl0005 | int2 | cg0006 | cg2070 | CONSERVED HYPOTHETICAL PROTEIN; Belongs to the UPF0232 family. | Putative phage integrase (C-terminal fragment). | 0.965 |
| Cgl0247 | Cgl1243 | cg0302 | cg1400 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | Putative DNA polymerase III alpha subunit, the Gram-positive type. | 0.900 |
| Cgl0247 | Cgl2116 | cg0302 | cg2321 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | 0.917 |
| Cgl0247 | Cgl2346 | cg0302 | cg2576 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | Putative DNA polymerase III delta subunit. | 0.928 |
| Cgl0247 | dnaE1 | cg0302 | cg2338 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | PUTATIVE DNA POLYMERASE III, ALPHA CHAIN. | 0.941 |
| Cgl0247 | dnaN | cg0302 | cg0004 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | DNA POLYMERASE III, BETA SUBUNIT; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.957 |
| Cgl0247 | dnaX | cg0302 | cg0376 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | PUTATIVE DNA POLYMERASE III, DELTA' SUBUNIT. | 0.919 |
| Cgl0247 | dnaZX | cg0302 | cg0296 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | DNA POLYMERASE III GAMMA AND TAU SUBUNITS; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.955 |
| Cgl1243 | Cgl0247 | cg1400 | cg0302 | Putative DNA polymerase III alpha subunit, the Gram-positive type. | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | 0.900 |
| Cgl1243 | Cgl2116 | cg1400 | cg2321 | Putative DNA polymerase III alpha subunit, the Gram-positive type. | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | 0.917 |
| Cgl1243 | Cgl2346 | cg1400 | cg2576 | Putative DNA polymerase III alpha subunit, the Gram-positive type. | Putative DNA polymerase III delta subunit. | 0.929 |
| Cgl1243 | dnaE1 | cg1400 | cg2338 | Putative DNA polymerase III alpha subunit, the Gram-positive type. | PUTATIVE DNA POLYMERASE III, ALPHA CHAIN. | 0.941 |
| Cgl1243 | dnaN | cg1400 | cg0004 | Putative DNA polymerase III alpha subunit, the Gram-positive type. | DNA POLYMERASE III, BETA SUBUNIT; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.957 |
| Cgl1243 | dnaX | cg1400 | cg0376 | Putative DNA polymerase III alpha subunit, the Gram-positive type. | PUTATIVE DNA POLYMERASE III, DELTA' SUBUNIT. | 0.919 |
| Cgl1243 | dnaZX | cg1400 | cg0296 | Putative DNA polymerase III alpha subunit, the Gram-positive type. | DNA POLYMERASE III GAMMA AND TAU SUBUNITS; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.955 |
| Cgl2116 | Cgl0247 | cg2321 | cg0302 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | 0.917 |
| Cgl2116 | Cgl1243 | cg2321 | cg1400 | DNA polymerase III epsilon subunit or related 3'-5' exonuclease. | Putative DNA polymerase III alpha subunit, the Gram-positive type. | 0.917 |
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