STRINGSTRING
scoA scoA scoB scoB pcaF pcaF pcaL pcaL citE citE tcbF tcbF pcaR pcaR tfdF tfdF Cgl3026 Cgl3026 accBC accBC fadD1 fadD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scoAPROBABLE FESUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE SUBUNIT. (250 aa)    
Predicted Functional Partners:
scoB
PROBABLE SUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE SUBUNIT.
 0.999
pcaF
PUTATIVE ACETYL-COA:ACETYLTRANSFERASE; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.975
pcaL
3-OXOADIPATE ENOL-LACTONE HYDROLASE/4-CARBOXYMUCONOLACTONEDECARBOXYLASE.
  
 
 0.846
citE
CITRYL-COA LYASE BETA SUBUNIT HOMOLOG; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.836
tcbF
Maleylacetate reductase.
 
 
 0.801
pcaR
Bacterial regulatory proteins, IclR family.
  
  
 0.787
tfdF
MALEYLACETATE REDUCTASE.
 
 
 0.700
Cgl3026
Aromatic-ring hydroxylase (flavoprotein monooxygenase); Catalyzes the NADH-dependent conversion of 3-hydroxybenzoate to gentisate (2,5-dihydroxybenzoate). Is involved in the utilization of 3-hydroxybenzoate as a sole source of carbon and energy for C.glutamicum growth. Displays a high preference for NADH over NADPH as cosubstrate. Is not active with 4-hydroxybenzoate, salicylate, protocatechuate or benzoate as substrates.
     
 0.589
accBC
BIOTIN CARBOXYLASE AND BIOTIN CARBOXYL CARRIER PROTEIN.
  
  
 0.560
fadD1
PUTATIVE FATTY-ACID--COA LIGASE TRANSMEMBRANE PROTEIN.
  
  
 0.524
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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