STRINGSTRING
pcaL pcaL pcaI pcaI pcaB1 pcaB1 pcaB2 pcaB2 catC catC tfdF tfdF pcaR pcaR pcaF pcaF scoA scoA catA1 catA1 scoB scoB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaL3-OXOADIPATE ENOL-LACTONE HYDROLASE/4-CARBOXYMUCONOLACTONEDECARBOXYLASE. (251 aa)    
Predicted Functional Partners:
pcaI
3-OXOADIPATE ENOL-LACTONE HYDROLASE/4-CARBOXYMUCONOLACTONEDECARBOXYLASE.
 
 0.999
pcaB1
3-CARBOXY-CIS,CIS-MUCONATE CYCLOISOMERASE.
  
 0.979
pcaB2
PUTATIVE 3-CARBOXY-CIS,CIS-MUCONATE CYCLOISOMERASE.
  
 0.966
catC
MUCONOLACTONE ISOMERASE; Belongs to the muconolactone Delta-isomerase family.
 
 
 0.940
tfdF
MALEYLACETATE REDUCTASE.
     
 0.901
pcaR
Bacterial regulatory proteins, IclR family.
 
    0.899
pcaF
PUTATIVE ACETYL-COA:ACETYLTRANSFERASE; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.874
scoA
PROBABLE FESUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE SUBUNIT.
  
 
 0.846
catA1
CATECHOL 1,2-DIOXYGENASE.
 
   
 0.828
scoB
PROBABLE SUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE SUBUNIT.
  
 
 0.824
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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