STRINGSTRING
Cgl2394 Cgl2394 Cgl1235 Cgl1235 cgtS4 cgtS4 Cgl2445 Cgl2445 Cgl1820 Cgl1820 cgtS6 cgtS6 Cgl2894 Cgl2894 pcaL pcaL cgtR6 cgtR6 pcaF pcaF Cgl1038 Cgl1038
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl2394ATP-dependent transcriptional regulator, LuxR family. (687 aa)    
Predicted Functional Partners:
Cgl1235
TRANSCRIPTIONAL REGULATOR, CRO/CI FAMILY.
  
  
 0.831
cgtS4
Probable two component sensor kinase.
  
 
 0.815
Cgl2445
Bacterial regulatory proteins, TetR family.
  
  
 0.810
Cgl1820
Putative transcriptional regulator.
   
 
 0.799
cgtS6
Probable two component sensor kinase.
  
 
 0.799
Cgl2894
Bacterial regulatory proteins, GntR family.
   
  
 0.797
pcaL
3-OXOADIPATE ENOL-LACTONE HYDROLASE/4-CARBOXYMUCONOLACTONEDECARBOXYLASE.
  
    0.796
cgtR6
Putative two component response regulator.
   
  
 0.786
pcaF
PUTATIVE ACETYL-COA:ACETYLTRANSFERASE; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.769
Cgl1038
SENSORY BOX/GGDEF FAMILY PROTEIN.
  
  
 0.753
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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