Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl1453 | glbO | cg1644 | cg2689 | Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Hemoglobin-like protein. | 0.471 |
Cgl2425 | glbO | cg2661 | cg2689 | Putative dithiol-disulfide isomerase involved in polyketide biosynthesis. | Hemoglobin-like protein. | 0.555 |
Cgl2425 | mrx1 | cg2661 | cg0964 | Putative dithiol-disulfide isomerase involved in polyketide biosynthesis. | Glutaredoxin or related protein; Involved in defense against toxic arsenate. Involved in the mycothiol/myoredoxin redox pathway which uses a mycothioltransferase mechanism; functions as a monothiol mixed disulfide reductase and is recycled by a second mycothiol forming mycothione which in turn is reduced in a NADPH-dependent manner. | 0.843 |
Cgl2425 | whiB1 | cg2661 | cg0878 | Putative dithiol-disulfide isomerase involved in polyketide biosynthesis. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.546 |
Cgl2447 | chrA | cg2688 | cg2690 | ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA. | CHROMATE TRANSPORTER. | 0.484 |
Cgl2447 | glbO | cg2688 | cg2689 | ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA. | Hemoglobin-like protein. | 0.623 |
chrA | Cgl2447 | cg2690 | cg2688 | CHROMATE TRANSPORTER. | ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA. | 0.484 |
chrA | glbO | cg2690 | cg2689 | CHROMATE TRANSPORTER. | Hemoglobin-like protein. | 0.744 |
ctpC | glbO | cg1329 | cg2689 | Cation transport ATPase. | Hemoglobin-like protein. | 0.611 |
glbO | Cgl1453 | cg2689 | cg1644 | Hemoglobin-like protein. | Uncharacterized protein, possibly involved in aromatic compounds catabolism. | 0.471 |
glbO | Cgl2425 | cg2689 | cg2661 | Hemoglobin-like protein. | Putative dithiol-disulfide isomerase involved in polyketide biosynthesis. | 0.555 |
glbO | Cgl2447 | cg2689 | cg2688 | Hemoglobin-like protein. | ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA. | 0.623 |
glbO | chrA | cg2689 | cg2690 | Hemoglobin-like protein. | CHROMATE TRANSPORTER. | 0.744 |
glbO | ctpC | cg2689 | cg1329 | Hemoglobin-like protein. | Cation transport ATPase. | 0.611 |
glbO | hmp | cg2689 | cg3141 | Hemoglobin-like protein. | FLAVOHEMOPROTEIN; Belongs to the globin family. | 0.477 |
glbO | mrx1 | cg2689 | cg0964 | Hemoglobin-like protein. | Glutaredoxin or related protein; Involved in defense against toxic arsenate. Involved in the mycothiol/myoredoxin redox pathway which uses a mycothioltransferase mechanism; functions as a monothiol mixed disulfide reductase and is recycled by a second mycothiol forming mycothione which in turn is reduced in a NADPH-dependent manner. | 0.473 |
glbO | rbpA | cg2689 | cg1671 | Hemoglobin-like protein. | Putative membrane-associated GTPase; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.608 |
glbO | whiB1 | cg2689 | cg0878 | Hemoglobin-like protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.538 |
glbO | whiB4 | cg2689 | cg0337 | Hemoglobin-like protein. | PUTATIVE REGULATORY PROTEIN (WHIB-RELATED PROTEIN); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.540 |
hmp | glbO | cg3141 | cg2689 | FLAVOHEMOPROTEIN; Belongs to the globin family. | Hemoglobin-like protein. | 0.477 |
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