Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aecD | cysE | cg2536 | cg2834 | Cystathionine beta-Lyase. | Serine O-Acetyltransferase. | 0.963 |
aecD | cysK | cg2536 | cg2833 | Cystathionine beta-Lyase. | O-Acetylserine (Thiol)-Lyase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.950 |
aecD | hom | cg2536 | cg1337 | Cystathionine beta-Lyase. | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | 0.845 |
aecD | sdaA | cg2536 | cg1852 | Cystathionine beta-Lyase. | PROBABLE L-SERINE DEHYDRATASE (L-SERINE DEAMINASE); Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.672 |
aecD | tdcB | cg2536 | cg1116 | Cystathionine beta-Lyase. | THREONINE DEHYDRATASE. | 0.825 |
aecD | thrB | cg2536 | cg1338 | Cystathionine beta-Lyase. | Homoserine Kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.800 |
cysE | aecD | cg2834 | cg2536 | Serine O-Acetyltransferase. | Cystathionine beta-Lyase. | 0.963 |
cysE | cysK | cg2834 | cg2833 | Serine O-Acetyltransferase. | O-Acetylserine (Thiol)-Lyase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.999 |
cysE | cysS | cg2834 | cg2924 | Serine O-Acetyltransferase. | CYSTEINE TRNA SYNTHETASE; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.971 |
cysE | cysS2 | cg2834 | cg1709 | Serine O-Acetyltransferase. | PUTATIVE CYSTEINE TRNA SYNTHETASE; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.867 |
cysE | glyA | cg2834 | cg1133 | Serine O-Acetyltransferase. | Serine Hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.894 |
cysE | hom | cg2834 | cg1337 | Serine O-Acetyltransferase. | Homoserine Dehydrogenase; Belongs to the homoserine dehydrogenase family. | 0.839 |
cysE | sdaA | cg2834 | cg1852 | Serine O-Acetyltransferase. | PROBABLE L-SERINE DEHYDRATASE (L-SERINE DEAMINASE); Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.911 |
cysE | serB | cg2834 | cg2779 | Serine O-Acetyltransferase. | Phosphoserine Phosphatase. | 0.869 |
cysE | tdcB | cg2834 | cg1116 | Serine O-Acetyltransferase. | THREONINE DEHYDRATASE. | 0.822 |
cysE | thrB | cg2834 | cg1338 | Serine O-Acetyltransferase. | Homoserine Kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.832 |
cysK | aecD | cg2833 | cg2536 | O-Acetylserine (Thiol)-Lyase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Cystathionine beta-Lyase. | 0.950 |
cysK | cysE | cg2833 | cg2834 | O-Acetylserine (Thiol)-Lyase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Serine O-Acetyltransferase. | 0.999 |
cysK | cysS | cg2833 | cg2924 | O-Acetylserine (Thiol)-Lyase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | CYSTEINE TRNA SYNTHETASE; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.912 |
cysK | cysS2 | cg2833 | cg1709 | O-Acetylserine (Thiol)-Lyase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | PUTATIVE CYSTEINE TRNA SYNTHETASE; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.854 |
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