Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl0243 | Cgl0782 | cg0297 | cg0892 | Uncharacterized BCR, YbaB family COG0718; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Conserved hypothetical protein. | 0.989 |
| Cgl0243 | clpP1 | cg0297 | cg2645 | Uncharacterized BCR, YbaB family COG0718; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.788 |
| Cgl0243 | clpP2 | cg0297 | cg2644 | Uncharacterized BCR, YbaB family COG0718; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP2; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.944 |
| Cgl0243 | hflX | cg0297 | cg2126 | Uncharacterized BCR, YbaB family COG0718; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.718 |
| Cgl0243 | ptrB | cg0297 | cg2873 | Uncharacterized BCR, YbaB family COG0718; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | PROLYL OLIGOPEPTIDASE. | 0.979 |
| Cgl0243 | recR | cg0297 | cg0298 | Uncharacterized BCR, YbaB family COG0718; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA repair protein (RecF pathway); May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.987 |
| Cgl0340 | ptrB | cg0410 | cg2873 | PUTATIVE PROLYL ENDOPEPTIDASE. | PROLYL OLIGOPEPTIDASE. | 0.437 |
| Cgl0782 | Cgl0243 | cg0892 | cg0297 | Conserved hypothetical protein. | Uncharacterized BCR, YbaB family COG0718; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.989 |
| Cgl0782 | clpP1 | cg0892 | cg2645 | Conserved hypothetical protein. | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.741 |
| Cgl0782 | clpP2 | cg0892 | cg2644 | Conserved hypothetical protein. | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP2; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.944 |
| Cgl0782 | hflX | cg0892 | cg2126 | Conserved hypothetical protein. | GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.718 |
| Cgl0782 | ptrB | cg0892 | cg2873 | Conserved hypothetical protein. | PROLYL OLIGOPEPTIDASE. | 0.968 |
| Cgl0782 | recR | cg0892 | cg0298 | Conserved hypothetical protein. | DNA repair protein (RecF pathway); May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.797 |
| Cgl2594 | dctA | cg2869 | cg2870 | Predicted deacetylase. | Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.669 |
| Cgl2594 | ptrB | cg2869 | cg2873 | Predicted deacetylase. | PROLYL OLIGOPEPTIDASE. | 0.536 |
| Cgl2594 | purC | cg2869 | cg2874 | Predicted deacetylase. | PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE; Belongs to the SAICAR synthetase family. | 0.473 |
| clpP1 | Cgl0243 | cg2645 | cg0297 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Uncharacterized BCR, YbaB family COG0718; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.788 |
| clpP1 | Cgl0782 | cg2645 | cg0892 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Conserved hypothetical protein. | 0.741 |
| clpP1 | clpP2 | cg2645 | cg2644 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP2; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.999 |
| clpP1 | ptrB | cg2645 | cg2873 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | PROLYL OLIGOPEPTIDASE. | 0.963 |
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