Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0575 | Cgl2599 | cg0665 | cg2877 | SERINE PROTEASE; Belongs to the peptidase S8 family. | AMINOTRANSFERASE CLASS I PROTEIN. | 0.797 |
Cgl0575 | pepE | cg0665 | cg1681 | SERINE PROTEASE; Belongs to the peptidase S8 family. | PROLINE DIPEPTIDASE. | 0.814 |
Cgl0575 | ribG | cg0665 | cg1800 | SERINE PROTEASE; Belongs to the peptidase S8 family. | PUTATIVE BIFUNCTIONAL RIBOFLAVIN-SPECIFIC DEAMINASE/REDUCTASE; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.711 |
Cgl0766 | Cgl2599 | cg0875 | cg2877 | Conserved hypothetical protein. | AMINOTRANSFERASE CLASS I PROTEIN. | 0.477 |
Cgl0814 | Cgl2599 | cg0931 | cg2877 | PROBABLE PYRIDOXAL PHOSPHATE AMINOTRANSFERASE. | AMINOTRANSFERASE CLASS I PROTEIN. | 0.449 |
Cgl0814 | gltB | cg0931 | cg0229 | PROBABLE PYRIDOXAL PHOSPHATE AMINOTRANSFERASE. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.517 |
Cgl2599 | Cgl0575 | cg2877 | cg0665 | AMINOTRANSFERASE CLASS I PROTEIN. | SERINE PROTEASE; Belongs to the peptidase S8 family. | 0.797 |
Cgl2599 | Cgl0766 | cg2877 | cg0875 | AMINOTRANSFERASE CLASS I PROTEIN. | Conserved hypothetical protein. | 0.477 |
Cgl2599 | Cgl0814 | cg2877 | cg0931 | AMINOTRANSFERASE CLASS I PROTEIN. | PROBABLE PYRIDOXAL PHOSPHATE AMINOTRANSFERASE. | 0.449 |
Cgl2599 | Cgl2601 | cg2877 | cg2880 | AMINOTRANSFERASE CLASS I PROTEIN. | HIT family hydrolase. | 0.623 |
Cgl2599 | gltB | cg2877 | cg0229 | AMINOTRANSFERASE CLASS I PROTEIN. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.517 |
Cgl2599 | pepE | cg2877 | cg1681 | AMINOTRANSFERASE CLASS I PROTEIN. | PROLINE DIPEPTIDASE. | 0.901 |
Cgl2599 | purB | cg2877 | cg2876 | AMINOTRANSFERASE CLASS I PROTEIN. | ADENYLOSUCCINATE LYASE; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.757 |
Cgl2599 | purC | cg2877 | cg2874 | AMINOTRANSFERASE CLASS I PROTEIN. | PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE; Belongs to the SAICAR synthetase family. | 0.462 |
Cgl2599 | purD | cg2877 | cg2878 | AMINOTRANSFERASE CLASS I PROTEIN. | PHOSPHORIBOSYLAMINE-GLYCINE LIGASE. | 0.789 |
Cgl2599 | ribG | cg2877 | cg1800 | AMINOTRANSFERASE CLASS I PROTEIN. | PUTATIVE BIFUNCTIONAL RIBOFLAVIN-SPECIFIC DEAMINASE/REDUCTASE; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.685 |
Cgl2601 | Cgl2599 | cg2880 | cg2877 | HIT family hydrolase. | AMINOTRANSFERASE CLASS I PROTEIN. | 0.623 |
Cgl2601 | purB | cg2880 | cg2876 | HIT family hydrolase. | ADENYLOSUCCINATE LYASE; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.601 |
Cgl2601 | purC | cg2880 | cg2874 | HIT family hydrolase. | PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE; Belongs to the SAICAR synthetase family. | 0.482 |
Cgl2601 | purD | cg2880 | cg2878 | HIT family hydrolase. | PHOSPHORIBOSYLAMINE-GLYCINE LIGASE. | 0.684 |
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