Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0115 | Cgl2819 | cg0150 | cg3120 | Bacterial regulatory protein. | Conserved hypothetical protein. | 0.410 |
Cgl0115 | dnaK | cg0150 | cg3100 | Bacterial regulatory protein. | Heat shock protein hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.432 |
Cgl0115 | hscA | cg0150 | cg2611 | Bacterial regulatory protein. | Molecular chaperone, HSP70 family. | 0.432 |
Cgl1680 | Cgl2819 | cg1895 | cg3120 | Putative secreted protein. | Conserved hypothetical protein. | 0.449 |
Cgl2819 | Cgl0115 | cg3120 | cg0150 | Conserved hypothetical protein. | Bacterial regulatory protein. | 0.410 |
Cgl2819 | Cgl1680 | cg3120 | cg1895 | Conserved hypothetical protein. | Putative secreted protein. | 0.449 |
Cgl2819 | cysJ | cg3120 | cg3119 | Conserved hypothetical protein. | Probable Sulfite Reductase (Flavoprotein). | 0.576 |
Cgl2819 | dnaK | cg3120 | cg3100 | Conserved hypothetical protein. | Heat shock protein hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.503 |
Cgl2819 | hscA | cg3120 | cg2611 | Conserved hypothetical protein. | Molecular chaperone, HSP70 family. | 0.436 |
cysJ | Cgl2819 | cg3119 | cg3120 | Probable Sulfite Reductase (Flavoprotein). | Conserved hypothetical protein. | 0.576 |
dnaK | Cgl0115 | cg3100 | cg0150 | Heat shock protein hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Bacterial regulatory protein. | 0.432 |
dnaK | Cgl2819 | cg3100 | cg3120 | Heat shock protein hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Conserved hypothetical protein. | 0.503 |
hscA | Cgl0115 | cg2611 | cg0150 | Molecular chaperone, HSP70 family. | Bacterial regulatory protein. | 0.432 |
hscA | Cgl2819 | cg2611 | cg3120 | Molecular chaperone, HSP70 family. | Conserved hypothetical protein. | 0.436 |