Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0183 | Cgl2680 | cg0228 | cg2965 | SENSOR HISTIDINE KINASE OF TWO-COMPONENT SYSTEM, FRAGMENT. | AraC-type transcriptional regulator. | 0.532 |
Cgl0183 | phnB1 | cg0228 | cg3122 | SENSOR HISTIDINE KINASE OF TWO-COMPONENT SYSTEM, FRAGMENT. | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | 0.471 |
Cgl2000 | phnB1 | cg2191 | cg3122 | Conserved hypothetical protein. | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | 0.719 |
Cgl2680 | Cgl0183 | cg2965 | cg0228 | AraC-type transcriptional regulator. | SENSOR HISTIDINE KINASE OF TWO-COMPONENT SYSTEM, FRAGMENT. | 0.532 |
Cgl2680 | phnB1 | cg2965 | cg3122 | AraC-type transcriptional regulator. | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | 0.740 |
Cgl2820 | Cgl2822 | cg3121 | cg3124 | Putative membrane protein. | Conserved hypothetical protein. | 0.445 |
Cgl2820 | phnB1 | cg3121 | cg3122 | Putative membrane protein. | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | 0.606 |
Cgl2822 | Cgl2820 | cg3124 | cg3121 | Conserved hypothetical protein. | Putative membrane protein. | 0.445 |
Cgl2822 | phnB1 | cg3124 | cg3122 | Conserved hypothetical protein. | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | 0.636 |
phnB1 | Cgl0183 | cg3122 | cg0228 | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | SENSOR HISTIDINE KINASE OF TWO-COMPONENT SYSTEM, FRAGMENT. | 0.471 |
phnB1 | Cgl2000 | cg3122 | cg2191 | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | Conserved hypothetical protein. | 0.719 |
phnB1 | Cgl2680 | cg3122 | cg2965 | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | AraC-type transcriptional regulator. | 0.740 |
phnB1 | Cgl2820 | cg3122 | cg3121 | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | Putative membrane protein. | 0.606 |
phnB1 | Cgl2822 | cg3122 | cg3124 | UNCHARACTERIZED PROTEIN, HOMOLOG OF PHNB E.COLI. | Conserved hypothetical protein. | 0.636 |